Pairwise Alignments

Query, 370 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 356 a.a., ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

 Score =  266 bits (681), Expect = 5e-76
 Identities = 151/328 (46%), Positives = 203/328 (61%), Gaps = 10/328 (3%)

Query: 11  VSFRGVQKSYDGENLIVKDLNLEIRKGEFLTLLGPSGSGKTTSLMMLAGFETPTAGEIQL 70
           VSFR +QKS+ G+  I+K L  +I  GEF+ L+GPSG GK+T L MLAG E  + GEI +
Sbjct: 4   VSFRNIQKSF-GKVQIIKGLGFDITDGEFVVLVGPSGCGKSTLLRMLAGLEDISGGEIMI 62

Query: 71  AGRSINNVPPHKRDIGMVFQNYALFPHMTVAENLAFPLSVRALSKTDISERVKRVLSMVQ 130
            GR +N++    RDI MVFQ+YAL+PHMTV EN+ F L +R+  K+   ERV R   ++ 
Sbjct: 63  DGRVVNDLESKDRDIAMVFQSYALYPHMTVGENMGFSLRLRSAEKSVTDERVARAAKILN 122

Query: 131 LDAFAQRYPAQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQLREHMQMEIKHLHQR 190
           LD+   RYP +LSGGQ+QRVA+ RA+V +P++ L DEPL  LD +LR  M+ EIK LHQR
Sbjct: 123 LDSLLGRYPRELSGGQRQRVAMGRAIVRDPKVFLFDEPLSNLDAKLRVAMRAEIKALHQR 182

Query: 191 LGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIAAPRTLYEEPKNTFVANFIG--ENNRL 248
           L  T VYVTHDQ EA+TM+DR+ V H G ++QI  P  LY+ P N FVA FIG    N +
Sbjct: 183 LKTTTVYVTHDQIEAMTMADRIVVMHDGIVEQIGTPLDLYDRPDNLFVAQFIGSPSMNVI 242

Query: 249 NGRLHSHSGERCVVELARGEKVEALAVNVGQVGGPVTLSVRPERVSLNGSSESCVNRF-- 306
            G +    G+ C VE A+G +    A      G PV   VRP  ++L G+++S   +   
Sbjct: 243 EGTVRRAGGD-CWVE-AQGARWPVPAATSAPDGQPVHYGVRPGDITLGGAAQSVAAKVIV 300

Query: 307 ---SGRVAEFIYLGDHVRVRLEVCGKAD 331
              +G   E +      R+ L V G+ D
Sbjct: 301 VEPTGAETELLVQVGEARLVLAVHGRVD 328