Pairwise Alignments

Query, 370 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 364 a.a., Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  271 bits (694), Expect = 2e-77
 Identities = 145/317 (45%), Positives = 207/317 (65%), Gaps = 5/317 (1%)

Query: 5   DSNDVLVSFRGVQKSYDGENLIVKDLNLEIRKGEFLTLLGPSGSGKTTSLMMLAGFETPT 64
           D+   LV+ + V K +D E + V +++L I KGE   LLG SG GK+T L MLAGFE PT
Sbjct: 3   DTTGFLVTEKLV-KRFD-EAVAVDEVSLSIGKGEIFALLGSSGCGKSTLLRMLAGFEKPT 60

Query: 65  AGEIQLAGRSINNVPPHKRDIGMVFQNYALFPHMTVAENLAFPLSVRALSKTDISERVKR 124
           +G I L G+ +  +PP+ R + M+FQ+YALFPH+ + EN+AF L    L K ++ +R   
Sbjct: 61  SGRILLGGQDVAAMPPYDRPVNMMFQSYALFPHLDIWENVAFGLKREGLPKAEVQQRTDE 120

Query: 125 VLSMVQLDAFAQRYPAQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQLREHMQMEI 184
           +L +VQL  +A+R P QLSGGQQQRVALAR+L   P+L+L+DEPLGALDK+LRE  Q E+
Sbjct: 121 MLGLVQLTPYAKRKPHQLSGGQQQRVALARSLAKRPKLLLLDEPLGALDKKLREQTQFEL 180

Query: 185 KHLHQRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIAAPRTLYEEPKNTFVANFIGE 244
            ++ +++GVTVV VTHDQ EA+TM+ R+A+  +G + Q+ +P  +YE P N FVA+FIG 
Sbjct: 181 VNIIEKVGVTVVMVTHDQEEAMTMASRIAIMSKGRVLQVGSPEEIYEHPANRFVADFIGN 240

Query: 245 NNRLNGRLHSHSGERCVVELARGEKVEALAVNVGQVGGPVTLSVRPERVSLN--GSSESC 302
            N   GRL     +RC      GE      V+ G +  PV ++VRPE++ ++     ++ 
Sbjct: 241 VNLFEGRLSVDETDRCAATTGIGEIHVGHGVS-GTLNMPVAIAVRPEKIEISKRRPDDAG 299

Query: 303 VNRFSGRVAEFIYLGDH 319
            N F+G+V E  Y G +
Sbjct: 300 PNVFTGKVKEIAYFGSY 316