Pairwise Alignments

Query, 346 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 341 a.a., Polyamine ABC transporter, periplasmic polyamine-binding protein from Pseudomonas putida KT2440

 Score =  206 bits (525), Expect = 5e-58
 Identities = 135/352 (38%), Positives = 197/352 (55%), Gaps = 18/352 (5%)

Query: 1   MLSSLKYSVLALSLM--GATQAMAGPDLTVVSFGGANKAAQVKAFYAPWESAGNGKIVAG 58
           +LS    +VL+ SL+      A+A   L  VS+GG  + AQ +A+  P+  A N K+V  
Sbjct: 2   LLSKRVTAVLSASLLTLACQAALAADSLNFVSWGGTTQDAQKEAWAVPFTKATNIKVVQ- 60

Query: 59  EYNGEMAKVKAMVDTKSVSWDLVEVESPELSRGCDEDMFEPLD-PKLFGNTADYVKGAIQ 117
           +   +  K+KAMV++ +V WD+V+VE+    R   E + EPLD  ++  +  D     + 
Sbjct: 61  DGPTDYGKLKAMVESGNVQWDVVDVEADFALRAASEGLLEPLDFNQIKRDKID--PRFVS 118

Query: 118 PCGVGFFVWSTVLAYNADKL-ASAPTSWADFWDTKKFPGKRGLRKG-AKYTLEFALMADG 175
             GVG F +S VL YN  KL A+ P  W   +DTK +PGKR L K  +   LE AL+ADG
Sbjct: 119 DHGVGSFFFSFVLGYNEGKLGANKPVDWTALFDTKAYPGKRALYKWPSPGVLELALLADG 178

Query: 176 VAPKDVYKVLAGKDGQDRAFKKLDELKPSIQWWEAGAQPPQYLASGDVVMSSAYNGRIAA 235
           VAP  +Y +       DRAFKKLD +K  I WW  GAQ  Q LASG+  +   +NGR+ A
Sbjct: 179 VAPDKLYPL-----DLDRAFKKLDTIKQDIVWWGGGAQSQQLLASGEASLGQFWNGRVYA 233

Query: 236 VQKE-SNLKVVWNGGIYDFDAWAIPKGLAKDRAEAAKKFIAFSVQPQQQKTYSENIAYGP 294
           +Q++ + + V W   +   D   IPKG AK++ EAA KF+A +   + Q  ++   AY P
Sbjct: 234 LQQDGAPVGVSWKQNLVMADFLVIPKG-AKNK-EAAMKFLANASSAEGQAEFANKTAYAP 291

Query: 295 ANTQAVPLLAKDVLKDMPTTPENIANQVQIDVSFWADNGEQLEQRFNSWAAK 346
            N  +V  L KD+  ++PT      +QV +D ++WA NG+ +  R+N W  K
Sbjct: 292 VNVDSVAKLDKDLAPNLPTA--YAQDQVTLDFAYWAKNGQAIAARWNEWLVK 341