Pairwise Alignments

Query, 214 a.a., cyclic AMP receptor protein from Pseudomonas simiae WCS417

Subject, 236 a.a., Transcriptional regulator, Crp/Fnr family from Variovorax sp. SCN45

 Score = 40.4 bits (93), Expect = 3e-08
 Identities = 42/166 (25%), Positives = 68/166 (40%), Gaps = 12/166 (7%)

Query: 40  TLFFIIKGSVTILIEDDDGREMIIAYLNTGDFFGELGLFEQAGKEQERSAWVRTKVECEV 99
           TL  ++K S+T      DGR + +  L+ G +FGE  L     +   RSA +       V
Sbjct: 64  TLEGLLKWSIT----SSDGRSVTLGGLSVGSWFGEGTLL----RALPRSADIIALRPSRV 115

Query: 100 AEISYAKFRELSQHDPDILYALSGQIAQRLRDTTRKVGDLAFFDVTGRVARCLLDLCKQP 159
           A++    F  L +      + L  QI +RL             D   +VAR L  L    
Sbjct: 116 AQLPLETFEWLHRTQRGFDHFLLQQINERLHWFMGSYAAHRLLDADSQVARALAGLF--- 172

Query: 160 DAMTHPDG-MQIKVTRQEIGRIVGCSREMVGRVLKDLEERNLVHVK 204
               HP     ++ +++EI  + G SR+     L  L+E   + ++
Sbjct: 173 HPWLHPGSEPHLQTSQEEIANLSGVSRQRCNAALNRLKEAGFLRIE 218