Pairwise Alignments

Query, 214 a.a., cyclic AMP receptor protein from Pseudomonas simiae WCS417

Subject, 244 a.a., DNA-binding transcriptional dual regulator from Pseudomonas putida KT2440

 Score = 43.9 bits (102), Expect = 3e-09
 Identities = 44/205 (21%), Positives = 89/205 (43%), Gaps = 10/205 (4%)

Query: 7   IPKIKNLDKL--LMHCQRRRHPAKHN--IICAGERSETLFFIIKGSVTILIEDDDGREMI 62
           +P   NL+ +  L    +R  P K    +   G+   +++ +  G++      D G E I
Sbjct: 25  LPLSLNLEDMDALDEIVKRGRPLKKGEFLFRQGDSFGSVYAVRSGALKTFSLSDSGEEQI 84

Query: 63  IAYLNTGDFFGELGLFEQAGKEQERSAWVRTKVECEVAEISYAKFRELSQHDPDILYALS 122
             +    +  G  G+  +A     ++     +    V EI + +  ELS   P +   L 
Sbjct: 85  TGFHLPSELVGLSGMDTEAYPVSAQA-----QETTSVCEIPFERLDELSVQLPQLRRQLM 139

Query: 123 GQIAQRLRDTTRKVGDLAFFDVTGRVARCLLDLCKQPDAMTHP-DGMQIKVTRQEIGRIV 181
             +++ +RD  + +  L+      R+A  L++L  +  A  +  +  ++ ++R EIG  +
Sbjct: 140 RVMSREIRDDQQMMLLLSKKTADERIATFLVNLSARFRARGYSANQFRLSMSRNEIGNYL 199

Query: 182 GCSREMVGRVLKDLEERNLVHVKGK 206
           G + E V RV    ++  L+  +GK
Sbjct: 200 GLAVETVSRVFTRFQQNGLLRAEGK 224