Pairwise Alignments

Query, 214 a.a., cyclic AMP receptor protein from Pseudomonas simiae WCS417

Subject, 214 a.a., DNA-binding transcriptional dual regulator from Pseudomonas putida KT2440

 Score =  356 bits (913), Expect = e-103
 Identities = 178/214 (83%), Positives = 192/214 (89%)

Query: 1   MVALTPIPKIKNLDKLLMHCQRRRHPAKHNIICAGERSETLFFIIKGSVTILIEDDDGRE 60
           MVA     KIKN+DKLL+HCQRRR+ AK NIICAG+R+ETL FIIKGSVTILIEDDDG E
Sbjct: 1   MVASALPAKIKNIDKLLVHCQRRRYTAKSNIICAGDRAETLSFIIKGSVTILIEDDDGHE 60

Query: 61  MIIAYLNTGDFFGELGLFEQAGKEQERSAWVRTKVECEVAEISYAKFRELSQHDPDILYA 120
           MIIAYLN GDFFGELGLFE    EQ+RSAWVR K ECEVAEISY KFREL++ DP+ILYA
Sbjct: 61  MIIAYLNHGDFFGELGLFEPVDGEQQRSAWVRAKTECEVAEISYEKFRELARQDPEILYA 120

Query: 121 LSGQIAQRLRDTTRKVGDLAFFDVTGRVARCLLDLCKQPDAMTHPDGMQIKVTRQEIGRI 180
           L  Q+AQRLR+TTRKVGDLAFFDVTGRVARCLL+LCKQPDAMTHPDGMQIK+TRQEIGRI
Sbjct: 121 LGSQMAQRLRNTTRKVGDLAFFDVTGRVARCLLELCKQPDAMTHPDGMQIKITRQEIGRI 180

Query: 181 VGCSREMVGRVLKDLEERNLVHVKGKTMVVFGTR 214
           VGCSREMVGRVLKDLEER+LV VKGKTMVV GTR
Sbjct: 181 VGCSREMVGRVLKDLEERSLVQVKGKTMVVHGTR 214