Pairwise Alignments

Query, 875 a.a., exoribonuclease R from Pseudomonas simiae WCS417

Subject, 774 a.a., transcription accessory protein from Pseudomonas simiae WCS417

 Score = 59.7 bits (143), Expect = 7e-13
 Identities = 50/142 (35%), Positives = 73/142 (51%), Gaps = 19/142 (13%)

Query: 660 EFMKD-RVGETFPGVITAVTGFGLFVELTDIYVEGLVHVTALPGDYYHFDPVHHRLAGER 718
           E +KD  +G    GV+T VT FG FV++  ++ +GLVH++AL   +   DP         
Sbjct: 641 EDLKDLELGMILEGVVTNVTNFGAFVDI-GVHQDGLVHISALSEKFIK-DP--------- 689

Query: 719 TGRSFRLGDTVEVQVMRVDLDERKIDFG--MSDKPAES-PGSRKKR-GSEPASKGKAAPA 774
              + + GD V+V+VM VD+  +++     MSD P E   G+R  R GS P      AP 
Sbjct: 690 -REAVKAGDVVKVKVMEVDIPRKRVGLSMRMSDTPGEKIDGARGARPGSAPRQSQNNAPR 748

Query: 775 K--ATAAEPAPAKAGRRSSTKE 794
           K  ATAA    A A   ++ K+
Sbjct: 749 KETATAAPSNNAMASLFANAKQ 770