Pairwise Alignments

Query, 875 a.a., exoribonuclease R from Pseudomonas simiae WCS417

Subject, 861 a.a., putative transcriptional accessory protein from Pseudomonas putida KT2440

 Score = 56.2 bits (134), Expect = 8e-12
 Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 16/129 (12%)

Query: 660 EFMKD-RVGETFPGVITAVTGFGLFVELTDIYVEGLVHVTALPGDYYHFDPVHHRLAGER 718
           E +KD   G    GV+T VT FG FV++  ++ +GLVH++AL   +   DP         
Sbjct: 728 EDLKDLEPGMILEGVVTNVTNFGAFVDI-GVHQDGLVHISALSEKFVK-DP--------- 776

Query: 719 TGRSFRLGDTVEVQVMRVDLDERKIDFG--MSDKPAES-PGSRKKRGSEPASKGKAAPAK 775
              + + GD V+V+VM VD+  +++     MSD P E   G+R        ++ + AP +
Sbjct: 777 -REAVKAGDVVKVKVMEVDIPRKRVGLSMRMSDTPGEKVEGNRGGNRGNGGNRQQQAPRQ 835

Query: 776 ATAAEPAPA 784
              A  APA
Sbjct: 836 RETATAAPA 844