Pairwise Alignments

Query, 240 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 220 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  109 bits (272), Expect = 5e-29
 Identities = 84/234 (35%), Positives = 122/234 (52%), Gaps = 19/234 (8%)

Query: 1   MRVAILDDEPAELRRVEQTLRQIPSTAEQPWTLHCFERGEDLLRQLRRETFDLLILDWQL 60
           MR+ +++D+ A    +   LRQ      + +TL     G   L  L+ ETFDL+ILD  L
Sbjct: 1   MRLLLVEDDIALGEGICDGLRQ------EGYTLDWLRDGVSGLHALQHETFDLVILDLGL 54

Query: 61  PDITGIALLRWTREHMESPPAVIMLTSRDAESDIVTALNSGADDYVSKPFRPNELKARVT 120
           P + G+ LLR  R   +S P V++LT+RDA  D +  L++GADDY+ KPF  NELKAR+ 
Sbjct: 55  PRMDGLELLRRLRAGGDSLP-VLILTARDALDDRIAGLDAGADDYLVKPFDLNELKARLR 113

Query: 121 AVLRRHGLQKSASHEVQSFNDLTFDDAELTVTRAGKPINLTEREYRLASCLFANLARPLS 180
           A+LRR       +  +     ++ D     V   G  + LT +EY L   L A   +  +
Sbjct: 114 ALLRR---SVGRAKVLIEHAGVSLDPTTQQVQYNGVEVVLTPKEYVLLHELLAQPGKVFT 170

Query: 181 REYLYERFWTHEEMVSSRPLDTHIYRLRNKL--GLTADRGWQLLTIYGYGYRLE 232
           RE L +  +  +E   S  L+ +IY LR KL  GL       + T+ G GY +E
Sbjct: 171 RERLTQLLYGWDEEPESNTLEVNIYHLRKKLFNGL-------IRTVRGIGYLVE 217