Pairwise Alignments

Query, 333 a.a., DNA-directed RNA polymerase subunit alpha from Pseudomonas simiae WCS417

Subject, 333 a.a., DNA-directed RNA polymerase subunit alpha from Pseudomonas putida KT2440

 Score =  640 bits (1650), Expect = 0.0
 Identities = 330/333 (99%), Positives = 333/333 (100%)

Query: 1   MQISVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE 60
           MQISVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
Sbjct: 1   MQISVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE 60

Query: 61  IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLSKKGSGVVTAADIQLDHD 120
           IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLSKKGSGVVTAADIQLDHD
Sbjct: 61  IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLSKKGSGVVTAADIQLDHD 120

Query: 121 VEIVNPDHVIANLASNGALNMKLTVARGRGYEPADSRQSDEDESRSIGRLQLDSSFSPVR 180
           VEIVNPDHVIANLASNGALNMKLTVARGRGYEPADSRQ+DEDESRSIGRLQLD+SFSPVR
Sbjct: 121 VEIVNPDHVIANLASNGALNMKLTVARGRGYEPADSRQTDEDESRSIGRLQLDASFSPVR 180

Query: 181 RIAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPV 240
           RIAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPV
Sbjct: 181 RIAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPV 240

Query: 241 VIEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT 300
           V+EQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
Sbjct: 241 VVEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT 300

Query: 301 EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA 333
           EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
Sbjct: 301 EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA 333