Pairwise Alignments

Query, 944 a.a., excinuclease ABC subunit A from Pseudomonas simiae WCS417

Subject, 944 a.a., excinuclease (uvrABC system protein A) from Pseudomonas putida KT2440

 Score = 1744 bits (4517), Expect = 0.0
 Identities = 871/944 (92%), Positives = 907/944 (96%)

Query: 1   MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60
           MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
Sbjct: 1   MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60

Query: 61  ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGIPRC 120
           ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVG PRC
Sbjct: 61  ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTPRC 120

Query: 121 PDHDIPLEAQTVSQMVDLVLAQPEGAKLMLLAPVIRERKGEHLSVFEELRAQGFVRARIN 180
           PDHDIPLEAQT+SQMVDLVL +PEG+KLMLLAPV+RERKGEHL+VF+ELRAQGFVRAR+N
Sbjct: 121 PDHDIPLEAQTISQMVDLVLERPEGSKLMLLAPVVRERKGEHLAVFDELRAQGFVRARVN 180

Query: 181 GKLYELDEAPKLDKQKKHSIDVVVDRFKVRADLQQRLAESFETALKLADGIALVAPMDDE 240
           GKLYELDE PKLDKQKKHSIDVVVDRFKVRADLQQRLAESFETALKLADGIALVAPMDDE
Sbjct: 181 GKLYELDELPKLDKQKKHSIDVVVDRFKVRADLQQRLAESFETALKLADGIALVAPMDDE 240

Query: 241 PGEEIIFSARFACPICGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDIKRLVNGDMT 300
            GEE IFSARFACP+CGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFD KRLVN ++T
Sbjct: 241 QGEETIFSARFACPVCGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDTKRLVNTELT 300

Query: 301 LAEGAIRGWDRRNVYYFQMLGSLASHYKFSLEVPFNQLPADQQKVILHGSGSQNVDFKYL 360
           LAEGAIRGWDRRNVYYFQMLGSLA+HY FSLE PF +L A+ QKVIL GSG Q+VDFKYL
Sbjct: 301 LAEGAIRGWDRRNVYYFQMLGSLAAHYGFSLEEPFGELSAEHQKVILQGSGKQSVDFKYL 360

Query: 361 NDRGDIVKRSHPFEGIVPNLERRYRETESASVREELAKFLSTQPCPDCRGTRLRREARHV 420
           NDRGDIVKRSHPFEGIVPNLERRYRETESA+VREELAKFL TQPCPDCRGTRLRREARHV
Sbjct: 361 NDRGDIVKRSHPFEGIVPNLERRYRETESATVREELAKFLGTQPCPDCRGTRLRREARHV 420

Query: 421 WVGEKTLPAVTNLPIGDACEYFGVLKLTGRRGEIADKILKEIRERLQFLVNVGLDYLSLD 480
           WVGEKTLPAVTNLPIG+A  YFG L LTGRRGEIA KILKEI ERLQFLVNVGLDYL+LD
Sbjct: 421 WVGEKTLPAVTNLPIGEASNYFGQLTLTGRRGEIAAKILKEICERLQFLVNVGLDYLTLD 480

Query: 481 RSADTLSGGEAQRIRLASQIGAGLVGVLYILDEPSIGLHQRDNDRLLGTLKHLRDIGNTV 540
           RSADTLSGGEAQRIRLASQIGAGLVGV+YILDEPSIGLHQRDNDRLL TL HLRD+GNTV
Sbjct: 481 RSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNDRLLATLNHLRDLGNTV 540

Query: 541 IVVEHDEDAIRLADYVVDIGPGAGVHGGHIVAEGTPAEVMAHPDSLTGKYLSGRVKIEVP 600
           IVVEHDEDAIRLADYVVDIGPGAGVHGG IVAEG+P EVM HPDSLTGKYLSGR KI VP
Sbjct: 541 IVVEHDEDAIRLADYVVDIGPGAGVHGGQIVAEGSPQEVMDHPDSLTGKYLSGRKKIVVP 600

Query: 601 AKRTPRNKKLALHLKGARGNNLRNVDLEIPIGLLTCVTGVSGSGKSTLINNTLFPLSATA 660
           AKRTPRNKKL L LKGARGNNL+NVDLE+PIGLLTCVTGVSGSGKSTLINNTL+PL+ATA
Sbjct: 601 AKRTPRNKKLQLKLKGARGNNLQNVDLEVPIGLLTCVTGVSGSGKSTLINNTLYPLAATA 660

Query: 661 LNGATTLEAAAHDSIKGLEHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPES 720
           LNGA++LEAA H S+ GL+HLDKVVDIDQSPIGRTPRSNPATYTG+FTPIRELF+GVPES
Sbjct: 661 LNGASSLEAAPHSSMDGLQHLDKVVDIDQSPIGRTPRSNPATYTGIFTPIRELFSGVPES 720

Query: 721 RSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLEIKYK 780
           RSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLEIKYK
Sbjct: 721 RSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLEIKYK 780

Query: 781 GKSIHETLEMTIEEARVFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLS 840
           GK+IHE LEMTIE+AR FFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLS
Sbjct: 781 GKNIHEVLEMTIEDAREFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLS 840

Query: 841 RELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWL 900
           RELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWL
Sbjct: 841 RELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWL 900

Query: 901 VDLGPEGGSKGGQIIAVGTPEQVSEMPQSHTGYYLKPLLERDRA 944
           VDLGPEGGSKGGQIIA GTPE++SEM QS+TG+YLKPLLERDRA
Sbjct: 901 VDLGPEGGSKGGQIIACGTPEELSEMKQSYTGHYLKPLLERDRA 944