Pairwise Alignments

Query, 464 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 454 a.a., Arabinose efflux permease from Kangiella aquimarina DSM 16071

 Score =  306 bits (784), Expect = 9e-88
 Identities = 181/456 (39%), Positives = 276/456 (60%), Gaps = 16/456 (3%)

Query: 6   SERMSSGETRAASGLALVFAFRMLGMFMVLPVLATYGMDLAGATPALIGLAIGAYGLTQA 65
           S  +++ E ++A  LA +FA RM G+FM+LPV+   G  L GAT  L+GLAIG YGL+QA
Sbjct: 3   SSSLTTLEKKSAISLASIFALRMFGLFMLLPVIRILGEGLEGATLPLLGLAIGIYGLSQA 62

Query: 66  IFQIPFGIISDRIGRRPVIYLGLIVFALGSVLAAQSDSIWGVIAGRILQGAGAISAAVMA 125
           I Q+P G++SD+IGR+PVIY GL+VF +GS++AA S+S+WG+I GR LQGAGAI++AVMA
Sbjct: 63  ILQLPLGLLSDKIGRKPVIYAGLLVFIVGSLVAANSESVWGLIVGRALQGAGAIASAVMA 122

Query: 126 LLSDLTREQHRTKAMAMIGMTIGLSFAVAMVVGPLLTRAFGLHGLFLATGGMALFGIVIV 185
           L +DL+R   R+K MAMIG +IGL+FA+++V+GPLL+    L GLF     +A   +++ 
Sbjct: 123 LAADLSRPHQRSKVMAMIGGSIGLAFALSLVLGPLLSNWLNLQGLFYLIAILAFLALLVA 182

Query: 186 AFMVPRSTG-TLQHRESGVARKALLPTLKHPDLLRLDLGIFVLHAMLMCSFVALPLALVE 244
           AF+VP      +   +   A +    T K   +  L L +FV+H  L+  F+ +P  L+ 
Sbjct: 183 AFVVPAVPAIDMPKIDLSFAERWRYVTAK-GRIFVLALSVFVIHWALVAVFLIVPDKLI- 240

Query: 245 KAGLPKEQHWWVYLTALLISFFAMIPFIIYGEKKRKMKRILLGAVTTLMLTELFFWQFGD 304
            +G    QH W+YL  L +S   M+P +I  EKK   ++++  A   L L+ +       
Sbjct: 241 ASGFELSQHSWIYLLVLALSIAIMLPMMINAEKKGWHRQVMQAAFLLLALSLVTLLTDWQ 300

Query: 305 SLRALVIGTVVFFTAFNLLEASLPSLISKVSPAGGKGTAMGVYSTSQFLGSALGGIMGGW 364
           SL   ++   +FF  FNLLEA LPS +S +  A  +GTA+G++STSQFLG+ LGG + G+
Sbjct: 301 SLWFWLLVLTLFFAGFNLLEAKLPSTVSNLFGAQYRGTALGIFSTSQFLGAFLGGSVTGY 360

Query: 365 MFQHGG------LSVVFLGCAGLAALWLAFAVTMREPPYVTSLRLPLSPEAIRESGLVER 418
           +    G      L++  +  AGLA  WL     ++   +V  L    + + ++ES L   
Sbjct: 361 LLPTLGFTGVVWLNIGLMIIAGLAIGWLGKLPEVKR--WVLELDEADTAKTVQESAL--- 415

Query: 419 LKAVVGVTDAVVVAEEAAIYIKLDTELLDRATLEQL 454
              + GV +A+    +  +Y+++D   ++R  LE+L
Sbjct: 416 --KLAGVIEAIADDHKGKVYLRVDDSTIEREELEKL 449