Pairwise Alignments

Query, 464 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 401 a.a., tetracycline efflux MFS transporter Tet(B) from Escherichia coli ECRC62

 Score = 75.1 bits (183), Expect = 4e-18
 Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 4/178 (2%)

Query: 29  LGMFMVLPVLATYGMDLAGATPAL--IGLAIGAYGLTQAIFQIPFGIISDRIGRRPVIYL 86
           +G+ +++PVL T   +   +       G+ +  Y L Q IF    G +SDR GRRPV+ L
Sbjct: 17  MGIGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPWLGKMSDRFGRRPVLLL 76

Query: 87  GLIVFALGSVLAAQSDSIWGVIAGRILQG-AGAISAAVMALLSDLTREQHRTKAMAMIGM 145
            LI  +L  +L A S ++W +  GR+L G  GA  A   ++++D T    R K    +G 
Sbjct: 77  SLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIADTTSASQRVKWFGWLGA 136

Query: 146 TIGLSFAVAMVVGPLLTRAFGLHGLFLATGGMALFGIVIVAFMVPRSTGTLQHRESGV 203
           + GL      ++G         H  F     + +   ++V F    +  T  + ++ V
Sbjct: 137 SFGLGLIAGPIIGG-FAGEISPHSPFFIAALLNIVAFLVVMFWFRETKNTRDNTDTEV 193



 Score = 45.1 bits (105), Expect = 4e-09
 Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 14/188 (7%)

Query: 20  LALVFAFRMLGMFMVLPVLATYGMDLAGATPALIGLAIGAYGLTQAIFQ-IPFGIISDRI 78
           L + F+ +++G      V   +  +  G    ++G ++   GL  ++FQ    G I+ + 
Sbjct: 214 LIIYFSAQLIGQIPAT-VWVLFTENRFGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKW 272

Query: 79  GRRPVIYLGLIVFALGSVLAAQSDSIWGVIAGRILQGAGAISAAVMALLSDLTREQHRTK 138
           G +  + LG I  +      A     W V    IL   G I+   +  +  +  + H+  
Sbjct: 273 GEKTAVLLGFIADSSAFAFLAFISEGWLVFPVLILLAGGGIALPALQGVMSIQTKSHQQG 332

Query: 139 AMAMIGMTIGLSFAVAMVVGPLLTRAFGLHGLFLATG-----GMALFGIVIVAFM----V 189
           A+   G+ + L+ A   V+GPLL      H L +  G     G+A + I+I+  M     
Sbjct: 333 ALQ--GLLVSLTNATG-VIGPLLFAVIYNHSLPIWDGWIWIIGLAFYCIIILLSMTFMLT 389

Query: 190 PRSTGTLQ 197
           P++ G+ Q
Sbjct: 390 PQAQGSKQ 397