Pairwise Alignments

Query, 319 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 318 a.a., Carnitine catabolism transcriptional activator from Alteromonas macleodii MIT1002

 Score =  165 bits (418), Expect = 1e-45
 Identities = 92/319 (28%), Positives = 164/319 (51%), Gaps = 13/319 (4%)

Query: 1   MVVVELGVLIYQGAQLAAVHGLTDLFGVANRIAAEHQSAQLPLLRVSHWQVDVTGKPARV 60
           M  +++ V+ Y  A  +A++G+ ++  +AN +  +  +             DV    +  
Sbjct: 12  MKEIKIAVINYPTASQSALYGIVEMLELANTMCEQINA-------------DVAFSASIY 58

Query: 61  FSSHPGPEQPMMAVLVPPSIGEFTEDQAPLALLEWIRQQHAAGTVLGGVCIGSIMLARSG 120
            +        +  V++PPS+ E   +    +L+ ++    + G +L   C+G+ +L + G
Sbjct: 59  KAEQLNSNALVDVVILPPSMSETFFEHDFTSLINYMEVMQSQGALLASACVGAFILGKGG 118

Query: 121 LLDGRSATTHWSSAKSFAARYPAVRLEADKPIVDDGDLITTAGLMAWSELGLRLVDRLMG 180
            LD +  TTHW  A  F A +P  +L+A   +V+   +IT  G MAW +L   ++  L  
Sbjct: 119 FLDNKVCTTHWRIADHFMATFPTAKLDAKAIVVNGEGVITAGGRMAWIDLVFEIISTLSS 178

Query: 181 PSIAADTARFLVIEHSDSASQCGSNFAPILGHGDAAILKVQHWLQASGAVDVSLAAMARE 240
           P+IA + ++ +V++           F+P   HGDA ++K Q++L    +  +SL+ +A  
Sbjct: 179 PTIALNLSKEMVVDTGYREQGFYHQFSPKKDHGDALVVKAQNYLANHYSQPISLSDLASH 238

Query: 241 AGLEERTFLRRFRNATGLKPTEYCQHLRVGKARQMLEFTNGTIDHIAWTVGYQDPSAFRA 300
             + +RT  RRF  A G+   +Y Q LR+  A Q +E +  +I  IA+ VGYQ+ +AFR 
Sbjct: 239 TFVSQRTLQRRFTQALGMSVIDYLQKLRLHHACQQIEVSTRSIADIAFNVGYQNVNAFRK 298

Query: 301 TFKKITGLAPSDYRSRFGV 319
            F+K  GL+P +YR RF +
Sbjct: 299 IFRKEYGLSPVEYRKRFAI 317