Pairwise Alignments

Query, 315 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 320 a.a., Predicted integral membrane protein from Enterobacter asburiae PDN3

 Score =  285 bits (729), Expect = 1e-81
 Identities = 143/311 (45%), Positives = 208/311 (66%), Gaps = 1/311 (0%)

Query: 6   RFKRWKKPLTIAFFLVLIVLFTLLARRIDWSEVVQTLGDFKVRTLVIAGALTLCSFLVYA 65
           R++  KK LT  FF+ + VL  + A+++DW EV + + ++    L+ A  L + S+L+Y 
Sbjct: 7   RWRLAKKILTWLFFIAVAVLLVVYAQKVDWEEVWKVIRNYNRMVLLGAVGLVIVSYLMYG 66

Query: 66  SFDLIGRTYIRQNLVWKQILPVGIISYAFNLNLSAWVGGIAMRYRLYSRLGVSTSNIAKI 125
            +DL+GR Y    L  +Q++ V  I YAFNL LS WVGGI MRYRLYSRLG+    I +I
Sbjct: 67  CYDLLGRAYCGHKLAKRQVMLVSFICYAFNLTLSTWVGGIGMRYRLYSRLGLPGGTITRI 126

Query: 126 LGLSLATNWFGYMAIAGVVFSSGLVTMPPGWKVSTTALQGIGALLVLASLGYLLACQFSK 185
             LS+ TNW GY+ + GV+F+ G+V +P  W +    L+ +G +L+L    YL AC F+K
Sbjct: 127 FSLSITTNWLGYILLGGVIFTIGVVQLPAHWYIDEATLRILGIVLLLIIAVYLWACAFAK 186

Query: 186 KRAWTIRGMEINLPSVRMACLQLMLGALNWSLMAAVIFTLLPAKLDYPLVLGVLLISAIA 245
           +R  TI+G ++ LPS + A LQ+ + + NW  M A+I+ L+   ++Y  VLGVLL+S+IA
Sbjct: 187 RRHMTIKGQKLVLPSWKFAVLQMAVSSANWMAMGAIIWLLIGEDVNYFFVLGVLLVSSIA 246

Query: 246 GVLTHIPAGLGVLEAVFIALLQHE-ASRGSLLAGLIAYRAIYFIVPLLIALVMYLGVEAK 304
           GV+ HIPAG+GVLEAVFIALL  E  S+G+++A L+AYR +Y+ +PL +A V YL +E++
Sbjct: 247 GVIVHIPAGIGVLEAVFIALLAGEHVSQGTIIAALLAYRMLYYFLPLALATVCYLVLESR 306

Query: 305 AKALRVKKTPA 315
           AK LR K   A
Sbjct: 307 AKKLRAKNEKA 317