Pairwise Alignments

Query, 644 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 559 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  199 bits (505), Expect = 4e-55
 Identities = 131/354 (37%), Positives = 198/354 (55%), Gaps = 15/354 (4%)

Query: 294 MGLALVGLGVLLLIAIVLGRRVVNRLKLLIAAMDDLAAGEGDLTKRVQISSKDEIGDMAS 353
           +G+A+V L V+  + ++L   ++  L L+ A +DD+AAGEGDLT+R+ I+S+DE+GD+A 
Sbjct: 209 LGVAVVLLLVIAAVGMLLANTILRPLHLMKANLDDIAAGEGDLTRRLAITSQDELGDLAG 268

Query: 354 AVNRFVDKLQPIVREAGDVAQRTGVEIGAMTLRNAGADAAAGLQRDEVAESLRALSQMAD 413
           A NRFVDK+  +VR+  ++  +    +  ++ +   ++ A   QR E  +   A++QM+ 
Sbjct: 269 AFNRFVDKIHGLVRQITEMTSQLTGLVSQVSDQAQRSEQAMERQRHETDQVATAINQMSS 328

Query: 414 EAQAESHAMQAALQQVVDIRQATDENSRTSAEV--GSL--IEALAGQVQAGSQVIERLAQ 469
            AQ  + + Q A        Q TD   + +  V  GS+  I AL   +++    ++ L Q
Sbjct: 329 AAQEVARSAQGASVAA----QQTDAEGQAAKRVVDGSIAQIHALVNDIRSSGVSLDSLQQ 384

Query: 470 QSEQIEVVLTVIHGIAEQTNLLALNAAIEAARAGETGRGFAVVADEVRALASKTQSSTGD 529
               I  VL+VI  IAEQTNLLALNAAIEAARAGE GRGFAVVADEVRALAS+TQ+ST +
Sbjct: 385 DVSSIVSVLSVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQTSTQE 444

Query: 530 IQAHIVALQQGAREAVDTIGKA-------GRQASEGLLVLRDSVRLQQTVQASVEQVHAA 582
           IQ  I  LQ G   AV+ + ++         QA+E    L    +L  T+ +   Q+ +A
Sbjct: 445 IQGMIDRLQTGTEAAVEAMRRSSDAGDGTSAQANEAGASLDTMAQLIGTINSMNAQIASA 504

Query: 583 IGLATRAAEHQAQGAHAVRGRVEVIHAQAERAAQAVQETTASGKVLDGLAAQLK 636
               T  AE   +  H +   V+ +  + +  AQ  +     G+ L  L  Q +
Sbjct: 505 AEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQTSRSLAELGQRLGQLVGQFR 558



 Score = 33.1 bits (74), Expect = 3e-05
 Identities = 54/208 (25%), Positives = 84/208 (40%), Gaps = 39/208 (18%)

Query: 457 VQAGSQVIERLAQQSEQIEVVLTVIHGIAEQTNLLALNAAIEAARAGETGRGFAVV---- 512
           ++A   V+E  A+  +++E VL  I G+A    LL + AA+    A    R   ++    
Sbjct: 186 IEAQVAVVE--AKVQKRMEGVLLSILGVA--VVLLLVIAAVGMLLANTILRPLHLMKANL 241

Query: 513 -------ADEVRALASKTQSSTGDIQAHIVALQQGAREAVDTIGKAGRQASEGL-----L 560
                   D  R LA  +Q   GD+              VD I    RQ +E       L
Sbjct: 242 DDIAAGEGDLTRRLAITSQDELGDLAGAF-------NRFVDKIHGLVRQITEMTSQLTGL 294

Query: 561 VLRDSVRLQQTVQASVEQVHAAIGLATRAAEHQAQGAHAVRGRVEVIHAQAERAAQAVQE 620
           V + S + Q++ QA   Q H    +AT   +  +      R         A+ A+ A Q+
Sbjct: 295 VSQVSDQAQRSEQAMERQRHETDQVATAINQMSSAAQEVARS--------AQGASVAAQQ 346

Query: 621 TTASG----KVLDGLAAQLKASLGQFRA 644
           T A G    +V+DG  AQ+ A +   R+
Sbjct: 347 TDAEGQAAKRVVDGSIAQIHALVNDIRS 374