Pairwise Alignments

Query, 644 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 715 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  189 bits (479), Expect = 5e-52
 Identities = 134/373 (35%), Positives = 191/373 (51%), Gaps = 8/373 (2%)

Query: 275 ANTTGAVQDAAGTLRWRIGMGLALVGLGVLLLIAIVLGRRVVNRLKLLIAAMDDLAAGEG 334
           A    A  DA  T    + +GL L+   V L++  ++ R V   +  +   ++D+A+GEG
Sbjct: 346 AEALKAQMDAENTRGTLLELGLGLLAAVVGLILVWLMARSVTRPILGVAHMLEDIASGEG 405

Query: 335 DLTKRVQISSKDEIGDMASAVNRFVDKLQPIVREAG---DVAQRTGVEIGAMTLRNAGAD 391
           DLT+R+    +DE+G +A   NRF+DKLQPI+ E       A+ T  +  A+  + +   
Sbjct: 406 DLTRRLAYDKQDELGQLAGWFNRFLDKLQPIIAEVKRSVQDARGTADQSAAIATQTSAGM 465

Query: 392 AAAGLQRDEVAESLRALSQMA-DEAQAESHAMQAALQQVVDIRQATDENSRTSAEVGSLI 450
                Q D+VA +   +S  A D A++ + A QAA     D  QAT +           I
Sbjct: 466 EQQYRQVDQVATASHEMSATAQDVARSAAQAAQAAR----DADQATRDGLTVIEHTTHNI 521

Query: 451 EALAGQVQAGSQVIERLAQQSEQIEVVLTVIHGIAEQTNLLALNAAIEAARAGETGRGFA 510
            ALA  +      +E LA  SE+I  VL VI GIAEQTNLLALNAAIEAARAGE GRGFA
Sbjct: 522 GALASDMSTAMTQVEGLAANSEKIGSVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFA 581

Query: 511 VVADEVRALASKTQSSTGDIQAHIVALQQGAREAVDTIGKAGRQASEGLLVLRDSVRLQQ 570
           VVADEVR LA +TQ S  + +  I  LQ G    V ++G + RQA   +  +  +V   +
Sbjct: 582 VVADEVRNLAQRTQESVEETRLVIEHLQNGTEAVVGSMGNSYRQAQGSVEQVGQAVTALR 641

Query: 571 TVQASVEQVHAAIGLATRAAEHQAQGAHAVRGRVEVIHAQAERAAQAVQETTASGKVLDG 630
            +  +V  +         AAE Q+  A  +   V  I    E  ++   E+    + L+ 
Sbjct: 642 QIGDAVTVISDMNLQIASAAEEQSAVAEEINNNVATIRDVTESLSEQANESARVSQALNS 701

Query: 631 LAAQLKASLGQFR 643
           LA Q +  + QFR
Sbjct: 702 LANQQQGLMDQFR 714



 Score = 25.4 bits (54), Expect = 0.009
 Identities = 29/132 (21%), Positives = 48/132 (36%), Gaps = 16/132 (12%)

Query: 16  VFVTLGIALLVQVLVAVALTRSTVTALEADLGNRLGIDSQ---------------KLSAE 60
           + V L    + + ++ VA     + + E DL  RL  D Q               KL   
Sbjct: 377 ILVWLMARSVTRPILGVAHMLEDIASGEGDLTRRLAYDKQDELGQLAGWFNRFLDKLQPI 436

Query: 61  LAQAGKEVTSSLDSLSTSTRQRLTAGLSTRLQEEQKQLRATLEKDLQDSANDMAQLLASV 120
           +A+  + V  +  +   S             Q  Q    AT   ++  +A D+A+  A  
Sbjct: 437 IAEVKRSVQDARGTADQSAAIATQTSAGMEQQYRQVDQVATASHEMSATAQDVARSAAQA 496

Query: 121 APRAMWDSDVPT 132
           A +A  D+D  T
Sbjct: 497 A-QAARDADQAT 507