Pairwise Alignments

Query, 232 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 210 a.a., outer membrane protein OmpW from Dickeya dianthicola ME23

 Score =  166 bits (419), Expect = 4e-46
 Identities = 89/224 (39%), Positives = 128/224 (57%), Gaps = 22/224 (9%)

Query: 10  LFALALVAPVVHAHEAGDILVRAGAITVNPKADSGHVKVDQGPLAGANLG-GKATMSSDT 68
           + A A++  +  AH+AGD+++RAG  TV P A S  V           LG G   ++++T
Sbjct: 8   MIAAAMIPVLAEAHQAGDVIIRAGTATVRPNAGSDDV-----------LGLGSFNVNNNT 56

Query: 69  QLGLNFAYMLTNHVGIELLAATPFEHDVKIKNTALGAANGKLGTLKHLPPTLSIVYYPLD 128
           QLGL F+YM T+++G+ELLAATPF+H + +         G++  +KHLPPTL   YY   
Sbjct: 57  QLGLTFSYMATDNIGVELLAATPFQHKIGVGGV------GQIAEVKHLPPTLMAQYYFGQ 110

Query: 129 NKSAFQPYVGAGINYTWIYDEHVGSRAQGAGFSNFKAENSWGWAAQIGADYMINDKWMIN 188
           +    +PY+G G+NYT  +DE      Q A  ++   ++SWG AAQ G DY +N  W++N
Sbjct: 111 SADKLRPYLGVGLNYTTFFDEKFNQTGQNAQLTDLNLKSSWGVAAQAGLDYNLNKDWLLN 170

Query: 189 AQARYIDISTKATVDNNALGQGTRAKVNVDVDPMVYMVGIGYKF 232
               ++DI T  TV   A GQ    K    +DP V+M G GYKF
Sbjct: 171 MSVWWMDIDT--TVKFKAAGQDQSIKTR--LDPWVFMFGFGYKF 210