Pairwise Alignments

Query, 421 a.a., peptide ABC transporter permease from Pseudomonas simiae WCS417

Subject, 832 a.a., putative ABC transporter, permease protein from Pseudomonas putida KT2440

 Score = 48.5 bits (114), Expect = 8e-10
 Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 17/164 (10%)

Query: 241 ITAFMLGLNNKISTFALQREINEFRGEPMLAILPGVAL-QELWSMMGTAEKALFVISLFV 299
           +T+F L   + +   AL R        P + IL   AL  +L S++     A+  + LFV
Sbjct: 664 LTSFYLAPGHDLDVVALSRAF------PAVTILQVDALLDQLRSILAQVTLAVEYVLLFV 717

Query: 300 VLTGLIGMLTAILTSLNERRREMAILRSVG-ARPWHIATLLIFEAFALALSGVVAGVGLL 358
           +  GL  +   +  +L+ER R+ A+LR++G ARP  +    I      A SG++A VG  
Sbjct: 718 LAAGLAVLFAGLQATLDERIRQGALLRALGAARPLLVKARRIEFGLLGAASGLLAAVGCE 777

Query: 359 YVCIAASRGYLQANYGLDLPMSWPSEYEWTLLAGILAAALLMGS 402
            +       ++   Y  DL   W S + W L+  +  A L+ G+
Sbjct: 778 LIT------WVLYRYAFDL--QW-SPHPWLLVLPLTGALLVGGA 812



 Score = 32.7 bits (73), Expect = 4e-05
 Identities = 43/148 (29%), Positives = 62/148 (41%), Gaps = 19/148 (12%)

Query: 279 QELWSMMGTAEKALFVISLFVVLTGLIGMLTAILTSLNERRR--EMAILRSVGARPWHIA 336
           Q++   +G AE+ L + SL  VL  L G+  A+  S    RR    A+LR +G       
Sbjct: 246 QQIGGALGKAERYLNMASLVAVL--LAGVAVALSASRYAARRLDASALLRCLGLSRHQAL 303

Query: 337 TLLIFEAFALALSGVVAGVGLLYVCIAASRGYLQANYGLDLPMSWPSEYEWTLLAGI--- 393
            L   +   LA+ G+VA +    +   A  G  +  +GL LP   P+      LAGI   
Sbjct: 304 GLYCLQ---LAMLGLVAALAGALLGWLAQLGLFRLLHGL-LPSVVPAGGIVPALAGIGTG 359

Query: 394 --------LAAALLMGSVPAWRAYRQSL 413
                   L     +G VP  R  R+ L
Sbjct: 360 LVALAGFALPPIAALGQVPPLRVLRRDL 387