Pairwise Alignments

Query, 166 a.a., antitermination protein NusB from Pseudomonas simiae WCS417

Subject, 166 a.a., transcription antitermination protein from Pseudomonas putida KT2440

 Score =  256 bits (654), Expect = 1e-73
 Identities = 128/166 (77%), Positives = 142/166 (85%)

Query: 1   MISDESDNFNPREPRPADAGKPSKNEKRRAARQLATQALYQRHLAGASLNEIEAQFRVDN 60
           MISDESD FNPR+P+PADAGKPSK+ KRR AR+LATQALYQ H+A  SLNEIEAQFRVDN
Sbjct: 1   MISDESDRFNPRDPKPADAGKPSKSAKRREARKLATQALYQWHMAQHSLNEIEAQFRVDN 60

Query: 61  DFTFADLPYFHDILHGVHAHLTEIDTALAPCLDLTIEELDPVELCVMRLSAWELLYRVDV 120
           DFT  D  YF +ILHGV A   EID AL PC+ + +EELDPVEL V+RLS WEL+ RVDV
Sbjct: 61  DFTDVDGAYFREILHGVPAIKGEIDKALVPCMTIALEELDPVELAVLRLSTWELIKRVDV 120

Query: 121 PYRVVINEGIELAKVYGSTDGHKFVNGVLDKLAPRLREAEVKAYKR 166
           PYRVVINEG+ELAKV+G+TDGHKFVNGVLDKLAP LREAEVKA KR
Sbjct: 121 PYRVVINEGVELAKVFGATDGHKFVNGVLDKLAPALREAEVKANKR 166