Pairwise Alignments

Query, 391 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 344 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 67.8 bits (164), Expect = 4e-16
 Identities = 75/310 (24%), Positives = 127/310 (40%), Gaps = 52/310 (16%)

Query: 75  VVLAAVWLYSAVYVVDEQEQAVVLRFGKYYETVGPGLNIYFPP-------------IDKK 121
           V+ A  W +S V  +D Q +AVVL FG        GL + +P              + ++
Sbjct: 27  VLAALAWAFSNVRQIDPQNRAVVLHFGALDRIQNAGLLVAWPQPFEQVVLLPAADRVIER 86

Query: 122 YMENVTRERAYTK-----------------QGQMLTEDENIVEVPLTVQYKISNLQDFVL 164
            +EN+ R  A  +                  G +LT D  +V++ + V YK++    FVL
Sbjct: 87  RVENLLRSDAAIQADRVASFATPLSDALAGSGYLLTGDAGVVQLDVRVFYKVTEPYAFVL 146

Query: 165 NVDQPEISLQHATESALRHVVGSTAMDQVLTEGRELM-----ASEIKERL---------Q 210
             D    +L      +   +  +  +D +L    EL+     A+E +ERL         +
Sbjct: 147 QGDHVLPALDRVVTRSAVALTAARDLDTILVARPELIGTDNGAAERRERLRGDLVQGINK 206

Query: 211 RFLDTYRT----GITVTQVNVQSAAAPREVQEAFDDVIRAREDEQRSRNQAETYANGVVP 266
           R  +   T    GI VT+V+VQS + P     AF+ V+ A +   ++   A T A  +  
Sbjct: 207 RLTELASTGLGLGIEVTRVDVQS-SLPGPAVNAFNAVLTASQQADKAVANARTDAEKLTQ 265

Query: 267 EARGQAQRILEDANGYRDEVVSRAKGEADRFTKLVAEYRKAPEVTRERLYLDTMQEVFSN 326
            A  QA R+++ A+    E ++ A+ +      L     K P +   RLY + + ++   
Sbjct: 266 TATQQADRLVQVAHAQASERLANAQAQTATVVSLAQV--KDPGLLL-RLYRERLPKILGQ 322

Query: 327 TSKVLVTGSK 336
              V     K
Sbjct: 323 AGAVTTVDPK 332