Pairwise Alignments

Query, 424 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 432 a.a., Membrane protein involved in the export of O-antigen and teichoic acid from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  116 bits (290), Expect = 2e-30
 Identities = 89/403 (22%), Positives = 194/403 (48%), Gaps = 13/403 (3%)

Query: 11  FERLRQHSVTRNASALGLMQVVNFAVPLMLLPFLTRQLGMEGFGQVAVVLAAIQVAYVLT 70
           F +L +H   +N   L ++Q  N  + L+++P L + +G++ FG V++ L+ I +A V  
Sbjct: 10  FSQLVRHKSVQNFIFLLIIQSSNILISLIVMPLLIQSIGVDRFGLVSLALSVILIANVFV 69

Query: 71  DYGFSFSATYAISLNRDDRGYINKKIGAIFAVKALLLIPTCLALLSAAYLISTFNAYFDY 130
            +G++ S    ++LN+ DR  ++  + ++ + K +L +   ++LL A      F  Y   
Sbjct: 70  GFGYNLSGPKDVALNQKDRKALSAILSSVISSKLVLALLASVSLLVAVKGFGLFPEYQVI 129

Query: 131 FVIAIIAVIAQAFLPIWLFQGLERMRNVALYTVGTKVLYVLAVLWVVDGEQDGEWV-ITA 189
            + +++ + ++A LP+W FQG+E+M+ V+   V +K+LY+  ++  + G  D +WV    
Sbjct: 130 LLYSLLMLFSEATLPVWFFQGMEKMKLVSAANVFSKLLYLTGIVLFIQGPADAKWVNFFF 189

Query: 190 WALAHCLGLAIAIHLMRCDGYRLVQPEWRAIKHEFIEGAPFFWSRLAVSFYTSASLLIVG 249
              A  + L +  ++       L    W+ I     E    F S  A     +  ++++ 
Sbjct: 190 GGSAVLINLLLLAYVHFQFRIALAFSSWQRIMGSLKENIYLFLSSFANHIAVNGGIVVLS 249

Query: 250 AYS-ASHAAQFAVSEQIYKAGQNIASPINNALFPYMARY--KDWRVFFRIVTVLGVLMAL 306
            ++ A     ++++E++    + + + I  A++P  A+    D + FFR +  +     +
Sbjct: 250 FFARAEVLGMYSLAERVSLVLRIVPALIAQAIYPNAAKLYEADVQGFFRFMKKVYATTLI 309

Query: 307 GC---LALALFAQPLLVGLFGEAYRSAEPLLLVFLLISVVNYFAVTFGYSAFSALGRVSF 363
            C   +++     P ++ L  +     E +L + +L+ V    ++  G +    +    +
Sbjct: 310 LCGLMVSIIWILAPFIIQLLAKE-PLPESVLYLRILVLVPMIASLNAGNTVLLLIANKKY 368

Query: 364 A--NVSVMLGAVFYTVMLAAQYLFFSLDAYGIAVAILLTELVV 404
              N S ++  V     +AA  LF ++   G+ VA++++EL V
Sbjct: 369 LLFNASWIMLTVMLLSTVAATSLFGTV---GLCVAMVMSELFV 408