Pairwise Alignments

Query, 839 a.a., fimbrial assembly protein from Pseudomonas simiae WCS417

Subject, 885 a.a., Fimbriae usher protein StfC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  771 bits (1991), Expect = 0.0
 Identities = 384/832 (46%), Positives = 542/832 (65%), Gaps = 37/832 (4%)

Query: 2   ASGDVQFNTDVLDLGDRTNIDLSQFSRSGFILPGTYPMVIKLNTNTLPEQSVAFYPPDN- 60
           A   +QFNT  LD+ D  ++DLS+FSR G+I+PG+Y + + +N + + + +V  Y  DN 
Sbjct: 29  AEAPIQFNTRFLDVKDDASLDLSRFSRKGYIMPGSYHLQVLVNQSQIVQDNVITYSVDNN 88

Query: 61  DLKGSQACLTPSIVEQFGLKKEKMTQLSWWKGGQCLDFHSLPGLEAVGDLASASLNVNVP 120
           D   +  CL+P +V   GLK E   ++ W   GQCL    L G+E   DL+ ++L V +P
Sbjct: 89  DPDNTYPCLSPELVSLLGLKPEIADKMIWINAGQCLQPDQLEGMETQTDLSQSTLTVIIP 148

Query: 121 QAYLEYTSINWDPPARWDEGISGLMVDYNMTAQSNY-QREEGTRNNVSGNGTVGANAGAW 179
           QAYLEY+   WDPP+RWDEGI G++ DYN+ +Q  + + ++G   ++SGNGTVGAN GAW
Sbjct: 149 QAYLEYSDEEWDPPSRWDEGIPGVLFDYNVNSQWRHAEHDDGDEYDISGNGTVGANLGAW 208

Query: 180 RLRADWQGRF---------DGGKTDGNQRMEWSRYYAYRAIPALRAQLVLGEDYLYSDLF 230
           RLRADWQ  +         D   +   Q  +W+RYYA+RAIP LRAQL LGE  L SD+F
Sbjct: 209 RLRADWQANYRHENDSEDKDNFGSSSEQNWDWNRYYAWRAIPQLRAQLTLGEGSLESDIF 268

Query: 231 DSFRFTGASLKSDESQLPPNLRGYAPEVVGVAKTNARVIISQQGRILYETVVAAGPFRIQ 290
           D F + G SL +D+  LPPNLRGYAP++ GVA+TNA+V ++Q+GR++YE+ V AGPFRIQ
Sbjct: 269 DGFNYVGGSLITDDQMLPPNLRGYAPDISGVARTNAKVTVTQRGRVIYESQVPAGPFRIQ 328

Query: 291 DLNDAVTGSLDVKIEEQDGSVHTFQVDTAGVPYLTRPGQVRYKVAAGRPSNLLYGDDGDP 350
           D+N+ V+G L VKIEEQ G V  + V TA +P+LTRPGQVRYK+AAGRP +  +  +G  
Sbjct: 329 DINETVSGDLHVKIEEQSGQVQEYDVSTASIPFLTRPGQVRYKLAAGRPQDWDHNMEGGF 388

Query: 351 FASGEFSWGVSNGWSLFGGGMGDNNYRALSVGIGRDLLAFGAVSVDATQSSATL------ 404
           F S E SWG++NGWSL+GG +G+ +Y+AL++G+GRDL   GA SVD T S ATL      
Sbjct: 389 FTSAEASWGIANGWSLYGGAIGEQDYQALALGLGRDLALLGAFSVDVTHSRATLPEGSAY 448

Query: 405 SGEELSGKSYRLQYSKSFDEYDSHVSFAGYRFSEKNYLSMSEYLDARHYGLYDQLGSGGE 464
               + G S+R  Y+K FD+ DS ++FAGYRFSE+NY++M E++D               
Sbjct: 449 GDGTIQGNSFRASYAKDFDDIDSRLTFAGYRFSEENYMTMDEFIDT-------------- 494

Query: 465 YGEGGERRKPIGGSKAAYTATFNKQFRDLGASFYLSYNKQTYWNRPDTQRWNLALSRYFS 524
           + +  +R++  G  K  YT T+++ F  +  + Y++Y  +TYWN+P+   +NL LS YF 
Sbjct: 495 HNDDNDRQR-TGHDKEMYTLTYSQNFSAINVNAYINYTHRTYWNQPNQDSYNLTLSHYFD 553

Query: 525 VGSVKNINASLNLHRSEDYNTRDNGMTLSVSVPLGRTGTLTTSVDRDRNGIDFSTRYSDR 584
           VG V+ I+ S+N  R+E  N RD+G+ +S+S+P G   TL+ +     +       Y +R
Sbjct: 554 VGEVRGISLSVNGFRNEYDNERDDGVYVSLSIPWGNNRTLSYNGSFSDDNNSNQVGYYER 613

Query: 585 LDERNSYQVSAG----DDSVSGYLSHTGELADVDLSASTEGSRYSSVSLSARGGATLTPQ 640
           +D+RN+YQ++AG      ++ GY  +    AD+D+SA+ +   Y+S  L+ +GGATLT +
Sbjct: 614 IDDRNNYQINAGRADNGATLDGYYRYQASYADIDVSANYQEGDYTSGGLNIQGGATLTAK 673

Query: 641 GGALHRAGTMGGTRLMVDTDGVADVPVRGYGVSTRTNTFGKAVISDIGSYQRTSASVDLE 700
           GGALHR    GG+RL+VD    A+VP+ GY     TN FGKAVI D+  Y R    +D+ 
Sbjct: 674 GGALHRTSVNGGSRLLVDVGDEANVPISGYSTPVYTNAFGKAVIVDVNDYYRNQVKIDIT 733

Query: 701 NLPTNVEATQSVTQLTLTEGAIGYRKLEVIAGAKAMAVLRLPDGSSPPFGALVKNIKQQD 760
            LP + EA  S+ Q TLTEGAIGYR++EV++G KAMA +RL DG +PPFGA V N +QQ 
Sbjct: 734 QLPEDAEAILSIAQATLTEGAIGYRRMEVLSGKKAMASIRLRDGGTPPFGAEVYNSRQQQ 793

Query: 761 TGVLNDGGSVYLSGIQAGGQMTVSWGGAERCTLTLPNILPADGLTNILNLPC 812
            G++ + GSVYL GI  G ++ V+W G  +C  TLP+ LP D  + +L LPC
Sbjct: 794 LGIVGEDGSVYLIGINPGERLQVTWEGKTQCEATLPDPLPGDLFSGLL-LPC 844