Pairwise Alignments

Query, 839 a.a., fimbrial assembly protein from Pseudomonas simiae WCS417

Subject, 829 a.a., FIG036507: Fimbriae usher protein StdB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  532 bits (1370), Expect = e-155
 Identities = 318/838 (37%), Positives = 476/838 (56%), Gaps = 50/838 (5%)

Query: 1   MASGDVQFNTDVLDLGDRTNIDLSQFSRSGFILPGTYPMVIKLNTNTLPEQSVAFYPPDN 60
           + S   +FN  +LD G+ +N+DL+ FSR G++ PG Y + I LN   + EQ      P  
Sbjct: 17  LKSQATEFNASLLDSGNLSNVDLTAFSREGYVAPGNYILDIWLNDQPVREQYPVRVVPVA 76

Query: 61  DLKGSQACLTPSIVEQFGLKKEKMTQLSWWKG---GQCLDFHSLPGLEAVGDLASASLNV 117
            L  +  C+T  +V   GLK + +  L    G   GQCL+  S    +      +  L  
Sbjct: 77  GLDAAVICVTTDMVAMLGLKDKIIHGLKPVTGIPDGQCLELRSADS-QVRYSAENQRLTF 135

Query: 118 NVPQAYLEYTSINWDPPARWDEGISGLMVDYNMTAQSNYQREEGTRNNVSGNGTVGANAG 177
            +PQA++ Y   +W PP+RW +G++  ++DY++       ++  T  + S  GT G N G
Sbjct: 136 IIPQAWMRYQDPDWVPPSRWSDGVTAGLLDYSLMVNRYMPQQGETSTSYSLYGTAGFNLG 195

Query: 178 AWRLRADWQ-GRFDGGKTDGNQRMEWSRYYAYRAIPALRAQLVLGEDYLYSDLFDSFRFT 236
           AWRLR+D+Q  RFD G+          + Y +RA+PALR++L LG+ YL S +FDSFRF 
Sbjct: 196 AWRLRSDYQYSRFDSGQGASQSDFYLPQTYLFRALPALRSKLTLGQTYLSSAIFDSFRFA 255

Query: 237 GASLKSDESQLPPNLRGYAPEVVGVAKTNARVIISQQGRILYETVVAAGPFRIQDLNDAV 296
           G +L SDE  LPP+L+GYAP++ G+A +NA+V +SQ GRILY+T V+ GPF + DL+  +
Sbjct: 256 GLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDLSQNI 315

Query: 297 TGSLDVKIEEQDGSVHTFQVDTAGVPYLTRPGQVRYKVAAGRPSNLLYGDD------GDP 350
           +G+LDV + E DGSV T+QV+TA VP++ R GQVRYKVAAGRP   LYG           
Sbjct: 316 SGNLDVSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRP---LYGGTHNNSTVSPD 372

Query: 351 FASGEFSWGVSNGWSLFGGGMGD-NNYRALSVGIGRDLLAFGAVSVDATQSSATL-SGEE 408
           F  GE +WG  N  SL+GG +    +Y++ ++GIG+++   GA+S D T+S A L  G++
Sbjct: 373 FLLGEATWGAFNNTSLYGGLIASTGDYQSAALGIGQNMGLLGALSADVTRSDARLPHGQK 432

Query: 409 LSGKSYRLQYSKSFDEYDSHVSFAGYRFSEKNYLSMSEYLDARHYGLYDQLGSGGEYGEG 468
            SG SYR+ Y+K+FD+  S ++F GYRFS++++LSM EYL  R               +G
Sbjct: 433 QSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYLQRR-------------TTDG 479

Query: 469 GERRKPIGGSKAAYTATFNKQFRDLGASFYLSYNKQTYWNRPDTQRWNLALSRYFSVGSV 528
           G+        K +YT T+++    L  S  LS ++  YWN      + L+L++ FS+G +
Sbjct: 480 GD----AWHEKQSYTVTYSQSVPVLNMSAALSVSRLNYWNAQSNNNYMLSLNKVFSLGDL 535

Query: 529 KNINASLNLHRSE-DYNTRDNGMTLSVSVPLGRTGTLTTSVDRD-RNGIDFSTRYSDRLD 586
           + ++AS++  R++       N +  ++S+P G +  ++ SV +D R G+  +  YSD  +
Sbjct: 536 QGLSASVSFARNQYTGGGSQNQVYATISIPWGDSRQVSYSVQKDNRGGLQQTVNYSDFHN 595

Query: 587 ERNSYQVSAG--------DDSVSGYLSHTGELADVDLSASTEGSRYSSVSLSARGGATLT 638
              ++ +SAG        + S SG +            A+ +  +Y S+ LS  G  T T
Sbjct: 596 PDTTWNISAGHNRYDTGSNSSFSGSVQSRLPWGQAAADATLQPGQYRSLGLSWYGSVTAT 655

Query: 639 PQGGALHRAGTMGGTRLMVDTDGVADVPVRGYGVSTRTNTFGKAVISDIGSYQRTSASVD 698
             G A  ++      R+M+DT  VA VPV G   S  TN FG  V+S   SY+R+  SVD
Sbjct: 656 AHGAAFSQSMAGNEPRMMIDTGDVAGVPVNGN--SGVTNRFGVGVVSAGSSYRRSDISVD 713

Query: 699 LENLPTNVEATQSVTQLTLTEGAIGYRKLEVIAGAKAMAVLRLPDGSSPPFGALVKNIKQ 758
           +  LP +V+ + SV    LTEGA+GYRK++   G + +  +RL DG+SPPFGALV + K 
Sbjct: 714 VAALPEDVDVSSSVISQVLTEGAVGYRKIDANQGEQVLGHIRLADGASPPFGALVVSWKT 773

Query: 759 QDT-GVLNDGGSVYLSGIQAGGQMT--VSWGGAERCTLTLPNILPADGLTNILNLPCQ 813
             T G++ DGG  YL+G+    + T  VSW G  +C LTLP  +        L LPC+
Sbjct: 774 GRTAGMVGDGGLAYLTGLSGEDRRTLNVSWDGRVQCRLTLPETVTLS--RGPLLLPCR 829