Pairwise Alignments

Query, 839 a.a., fimbrial assembly protein from Pseudomonas simiae WCS417

Subject, 866 a.a., predicted outer membrane usher protein (NCBI) from Escherichia coli BW25113

 Score =  302 bits (773), Expect = 6e-86
 Identities = 231/808 (28%), Positives = 382/808 (47%), Gaps = 63/808 (7%)

Query: 22  DLSQFSRSGFILPGTYPMVIKLNTNTLPEQSVAFYPPDNDLKGSQACLTPSIVEQFGLKK 81
           DLS+F +   I PG Y + I LN   +  ++V F     + KG  ACLT   ++  G+  
Sbjct: 53  DLSRFEKGQKITPGVYRVDIVLNQTIVDTRNVNFVEITPE-KGIAACLTTESLDAMGVNT 111

Query: 82  EKMTQLSWWKGGQCLDFHSL-PGLEAVGDLASASLNVNVPQAYLEYTSINWDPPARWDEG 140
           +            C+    + P      ++    L ++VPQ  ++  +  + PP RWDEG
Sbjct: 112 DAFPAFKQLDKQACVPLAEIIPDASVTFNVNKLRLEISVPQIAIKSNARGYVPPERWDEG 171

Query: 141 ISGLMVDYNMTAQSNYQREEGTRNNVSG--NGTVGANAGAWRLRADWQGRFDGGKTDGNQ 198
           I+ L++ Y+ +  ++      + +  S   N   G N G WRLR +       G+T    
Sbjct: 172 INALLLGYSFSGANSIHSSADSDSGDSYFLNLNSGVNLGPWRLRNNSTWSRSSGQT---- 227

Query: 199 RMEWSRYYAY--RAIPALRAQLVLGEDYLYSDLFDSFRFTGASLKSDESQLPPNLRGYAP 256
             EW    +Y  RA+  L+ +L +G+DY   D FDS  F G  L SD++ LP +L+G+AP
Sbjct: 228 -AEWKNLSSYLQRAVIPLKGELTVGDDYTAGDFFDSVSFRGVQLASDDNMLPDSLKGFAP 286

Query: 257 EVVGVAKTNARVIISQQGRILYETVVAAGPFRIQDL-NDAVTGSLDVKIEEQDGSVHTFQ 315
            V G+AK+NA++ I Q G  +Y+T V+ G F I DL + + +G L V+I+E DGSV+++ 
Sbjct: 287 VVRGIAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYS 346

Query: 316 VDTAGVPYLTRPGQVRYKVAAGRPSNLLYGDDGDPFASGEFSWGVSNGWSLFGGGMGDNN 375
           V  + VP L R G+++Y V   +            FA     WG   G + +GGG     
Sbjct: 347 VPFSSVPLLQRQGRIKYAVTLAKYRTNSNEQQESKFAQATLQWGGPWGTTWYGGGQYAEY 406

Query: 376 YRALSVGIGRDLLAFGAVSVDATQSSATLSGE-ELSGKSYRLQYSKSFDEYDSHVSFAGY 434
           YRA   G+G +L  FGA+S DATQ+ +TL+ + E  G+SYR  Y+K+ +   ++    GY
Sbjct: 407 YRAAMFGLGFNLGDFGAISFDATQAKSTLADQSEHKGQSYRFLYAKTLNHLGTNFQLMGY 466

Query: 435 RFSEKNYLSMSEYLDARHYGLYDQLGSGGEYGEGGERRKPIGG--------SKAAYTATF 486
           R+S   + ++S+        +Y  +  G E+ +G +   P+           +       
Sbjct: 467 RYSTSGFYTLSD-------TMYKHM-DGYEFNDGDDEDTPMWSRYYNLFYTKRGKLQVNI 518

Query: 487 NKQFRDLGASFYLSYNKQTYWNRPDTQRWNLALSRYFSVGSVKNINASLNLHRSEDYNTR 546
           ++Q  + G SFYLS ++QTYW+     R  L    Y +     ++  S N  +S      
Sbjct: 519 SQQLGEYG-SFYLSGSQQTYWHTDQQDR--LLQFGYNTQIKDLSLGISWNYSKSRGQPDA 575

Query: 547 DNGMTLSVSVPLG----RTG------------TLTTSVDRDRNGIDFSTRYSDRLDERN- 589
           D    L+ S+PL     R+             T  TS+D + +           LD+ N 
Sbjct: 576 DQVFALNFSLPLNLLLPRSNDSYTRKKNYAWMTSNTSIDNEGHTTQNLGLTETLLDDGNL 635

Query: 590 SYQVSAGDDSV------SGYLSHTGELAD--VDLSASTEGSRYSSVSLSARGGATLTPQG 641
           SY V  G +S       S  + + G  AD  V  + S  GS+   ++ +  G      QG
Sbjct: 636 SYSVQQGYNSEGKTANGSASMDYKGAFADARVGYNYSDNGSQ-QQLNYALSGSLVAHSQG 694

Query: 642 GALHRAGTMGGTRLMVDTDGVADVPVRGYGVSTRTNTFGKAVISDIGSYQRTSASVDLEN 701
             L +  ++G T +++   G  +  V       +T+  G  V+    SY+    ++D  +
Sbjct: 695 ITLGQ--SLGETNVLIAAPGAENTRVAN-STGLKTDWRGYTVVPYATSYRENRIALDAAS 751

Query: 702 LPTNVEATQSVTQLTLTEGAIGYRKLEVIAGAKAMAVLRLPDGSSPPFGALVK-NIKQQD 760
           L  NV+   +V  +  T+GA+   +    AGA+ + +     G    FGA+   +  Q +
Sbjct: 752 LKRNVDLENAVVNVVPTKGALVLAEFNAHAGARVL-MKTSKQGIPLRFGAIATLDGVQAN 810

Query: 761 TGVLNDGGSVYLSGIQAGGQMTVSWGGA 788
           +G+++D GS+Y++G+ A G ++V WG A
Sbjct: 811 SGIIDDDGSLYMAGLPAKGTISVRWGEA 838