Pairwise Alignments

Query, 839 a.a., fimbrial assembly protein from Pseudomonas simiae WCS417

Subject, 822 a.a., putative outer membrane usher protein from Escherichia coli BL21

 Score =  521 bits (1342), Expect = e-152
 Identities = 311/828 (37%), Positives = 457/828 (55%), Gaps = 52/828 (6%)

Query: 6   VQFNTDVLDLGDRTNIDLSQFSRSGFILPGTYPMVIKLNTNTLP-EQSVAFYPPDNDLKG 64
           V+FN D+++  DR N++LSQF   G +  G Y +   +N    P    + +   DN    
Sbjct: 22  VEFNKDLIEAEDRENVNLSQFETDGQLPVGKYSLSTLINNKRTPIHLDLQWVLIDNQ--- 78

Query: 65  SQACLTPSIVEQFGLKKE--KMTQLSWWKGGQCLDFHSLPGLEAVGDLASASLNVNVPQA 122
           +  C+TP  +   G   E  + TQ +   G  C        +    D     L+++ PQA
Sbjct: 79  TAVCVTPEQLTLLGFTDEFIEKTQQNLIDG--CYPIEKEKQITTYLDKGKMQLSISAPQA 136

Query: 123 YLEYTSINWDPPARWDEGISGLMVDYNMTAQSNYQREEGTRN-NVSGNGTVGANAGAWRL 181
           +L+Y   NW PP  W+ GI+G  +DYN+ A S+Y   +G  + N+S  G  G N GAWRL
Sbjct: 137 WLKYKDANWTPPELWNHGIAGAFLDYNLYA-SHYAPHQGDNSQNISSYGQAGVNLGAWRL 195

Query: 182 RADWQ--GRFDGGKTDGNQRMEWSRYYAYRAIPALRAQLVLGEDYLYSDLFDSFRFTGAS 239
           R D+Q    F+ GK+     +++ R Y +R IPA+ A+L +G+    S +FDSF F+G S
Sbjct: 196 RTDYQYDQSFNNGKSQATN-LDFPRIYLFRPIPAMNAKLTIGQYDTESSIFDSFHFSGIS 254

Query: 240 LKSDESQLPPNLRGYAPEVVGVAKTNARVIISQQGRILYETVVAAGPFRIQDLNDAVTGS 299
           LKSDE+ LPP+LRGYAP++ GVA+TNA+V +SQ  RI+Y+  V  GPF I +L + + G 
Sbjct: 255 LKSDENMLPPDLRGYAPQITGVAQTNAKVTVSQNNRIIYQENVPPGPFAITNLFNTLQGQ 314

Query: 300 LDVKIEEQDGSVHTFQVDTAGVPYLTRPGQVRYKVAAGRPSNLLYGDDGDPFA-SGEFSW 358
           LDVK+EE+DG V  +QV +  +PYLTR GQ+RY  A G+P+N+       PF  +GEFSW
Sbjct: 315 LDVKVEEEDGRVTQWQVASNSIPYLTRKGQIRYTTAMGKPTNVGGDSLQQPFFWTGEFSW 374

Query: 359 GVSNGWSLFGGGMGDN-NYRALSVGIGRDLLAFGAVSVDATQSSATLSGEEL-SGKSYRL 416
           G  N  SL+GG +  N +Y++L+ G+G +L + G++S D T+S A L  ++  +G SYR 
Sbjct: 375 GWLNNVSLYGGSVLTNRDYQSLAAGVGFNLNSLGSLSFDVTRSDAQLHNQDKETGYSYRA 434

Query: 417 QYSKSFDEYDSHVSFAGYRFSEKNYLSMSEYL-DARHYGLYDQLGSGGEYGEGGERRKPI 475
            YSK F+   S ++FAGYRFS+KN+++M+EY+ D  HY  Y                   
Sbjct: 435 NYSKRFESTGSQLTFAGYRFSDKNFVTMNEYINDTNHYTNYQ------------------ 476

Query: 476 GGSKAAYTATFNKQFRDLGASFYLSYNKQTYWNRPDTQRWNLALSRYFSVGSVKNINASL 535
              K +Y  TFN+    L  + Y+S  + TYW+      ++L+LSR F +G +KN++ SL
Sbjct: 477 -NEKESYIVTFNQYLESLRLNTYVSLARNTYWDASSNVNYSLSLSRDFDIGPLKNVSTSL 535

Query: 536 NLHRSEDYNTRDNGMTLSVSVPLGRTGTLTTSVDRDR-NGIDFSTRYSDRLDERNSYQVS 594
              R        + + L++S+P G + TL+  + R++ N I  +  + D  D  NS+ VS
Sbjct: 536 TFSRINWEEDNQDQLYLNISIPWGTSRTLSYGMQRNQDNEISHTASWYDSSDRNNSWSVS 595

Query: 595 AGDD---------SVSGYLSHTGELADVDLSASTEGSRYSSVSLSARGGATLTPQGGALH 645
           A  D         S+     H  E   + LS +++   Y S++ S  G  T T  G A H
Sbjct: 596 ASGDNDEFKDMKASLRASYQHNTENGRLYLSGTSQRDSYYSLNASWNGSFTATRHGAAFH 655

Query: 646 RAGTMGGTRLMVDTDGVADVPVRGYGVSTRTNTFGKAVISDIGSYQRTSASVDLENLPTN 705
                  +R M+D DG  D+P+        TN +G  VI  + SY  TS SVD  NLP N
Sbjct: 656 DYSGSADSRFMIDADGTEDIPLN--NKRAVTNRYGIGVIPSVSSYITTSLSVDTRNLPEN 713

Query: 706 VEATQSVTQLTLTEGAIGYRKLEVIAGAKAMAVLRLPDGSSPPFGALVKN-IKQQDTGVL 764
           V+   SV   TLTEGAIGY KL+   G + + V+RL DGS PP G  VK+    ++ G++
Sbjct: 714 VDIENSVITTTLTEGAIGYAKLDTRKGYQIIGVIRLADGSHPPLGISVKDETSHKELGLV 773

Query: 765 NDGGSVYLSGIQAGGQMTVSWGGAERCTLTLPNILPADGLTNILNLPC 812
            DGG VYL+GIQ   ++ + WG  + C +  PN   ++  T    LPC
Sbjct: 774 ADGGFVYLNGIQDDNKLALRWGD-KSCFIQPPN--SSNLTTGTAILPC 818