Pairwise Alignments

Query, 839 a.a., fimbrial assembly protein from Pseudomonas simiae WCS417

Subject, 881 a.a., putative outer membrane export usher protein from Escherichia coli BL21

 Score =  818 bits (2114), Expect = 0.0
 Identities = 412/834 (49%), Positives = 552/834 (66%), Gaps = 40/834 (4%)

Query: 2   ASGDVQFNTDVLDLGDRTNIDLSQFSRSGFILPGTYPMVIKLNTNTLPEQ-SVAFYPPDN 60
           A  D+QF++  L+L   T IDL +FS  G++ PG Y + ++LN   L E+  + +Y  ++
Sbjct: 29  AEDDIQFDSRFLELKGDTKIDLKRFSSQGYVEPGKYNLQVQLNKQPLAEEHDIYWYAGED 88

Query: 61  DLKGSQACLTPSIVEQFGLKKEKMTQLSWWKGGQCLDFHSLPGLEAVGDLASASLNVNVP 120
           D   + ACLTP +V QFGLK++    L W   G+CL    L G+E   DL+ ++L +++P
Sbjct: 89  DASKTYACLTPELVAQFGLKEDVAKNLQWSHDGKCLKPGQLEGMEIKADLSQSALVISLP 148

Query: 121 QAYLEYTSINWDPPARWDEGISGLMVDYNMTAQSNYQREEGTRNN-VSGNGTVGANAGAW 179
           QAYLEYT  +WDPP+RWD+GISG++ DY++TAQ+ ++   G  +N +SGNGTVG N G W
Sbjct: 149 QAYLEYTWPDWDPPSRWDDGISGIIADYSITAQTRHEENGGDDSNEISGNGTVGVNLGPW 208

Query: 180 RLRADWQGRFDGGKT----------DGNQRMEWSRYYAYRAIPALRAQLVLGEDYLYSDL 229
           R+RADWQ  +   ++          D  ++ EWSRYYA+RA+P+L+A+L LGEDYL SD+
Sbjct: 209 RVRADWQTDYQHTRSNDDDDEFSGDDTQKKWEWSRYYAWRALPSLKAKLALGEDYLNSDI 268

Query: 230 FDSFRFTGASLKSDESQLPPNLRGYAPEVVGVAKTNARVIISQQGRILYETVVAAGPFRI 289
           FD F + G S+ +D+  LPPNLRGYAP++ GVA T A+V +SQ GR++YET V AGPFRI
Sbjct: 269 FDGFNYVGGSVSTDDQMLPPNLRGYAPDISGVAHTTAKVTVSQMGRVIYETQVPAGPFRI 328

Query: 290 QDLNDAVTGSLDVKIEEQDGSVHTFQVDTAGVPYLTRPGQVRYKVAAGRPSNLLYGDDGD 349
           QDL D+++G+L V+IEEQ+G V  + + TA +PYLTRPGQVRYKV  GRP    +  +G 
Sbjct: 329 QDLGDSISGTLHVRIEEQNGQVQEYDISTASMPYLTRPGQVRYKVMMGRPQEWGHHVEGG 388

Query: 350 PFASGEFSWGVSNGWSLFGGGMGDNNYRALSVGIGRDLLAFGAVSVDATQSSATLSGE-- 407
            F+  E SWG++NGWSL+GG +GD NY++ ++GIGRDL  FGAV+ D T S   L  +  
Sbjct: 389 FFSGAEASWGIANGWSLYGGALGDKNYQSAALGIGRDLSTFGAVAFDVTHSHTKLDKDTA 448

Query: 408 ----ELSGKSYRLQYSKSFDEYDSHVSFAGYRFSEKNYLSMSEYLDARHYGLYDQLGSGG 463
                L G S+R+ YSK FD+ +S V+FAGYRFSE+N+++MSEYLDA             
Sbjct: 449 YGKGSLDGNSFRVSYSKDFDQLNSRVTFAGYRFSEENFMTMSEYLDA------------- 495

Query: 464 EYGEGGERRKPIGGSKAAYTATFNKQFRDLGASFYLSYNKQTYWNRPDTQRWNLALSRYF 523
                       G  K  YTAT+N+ FRD G S YL+Y + TYW+R +   +N+ LS YF
Sbjct: 496 ----SDSEMVRTGNDKEMYTATYNQNFRDAGVSVYLNYTRHTYWDREEQTNYNIMLSHYF 551

Query: 524 SVGSVKNINASLNLHRSEDYNTRDNGMTLSVSVPLGRTGTLTTSVDRDRNGIDFSTRYSD 583
           ++GS++N++ SL  +R E  N  D GM +S+S+P G   T++ + +           Y  
Sbjct: 552 NMGSIRNMSVSLTGYRYEYDNRADKGMYISLSMPWGDNSTVSYNGNYGSGTDSSQVGYFS 611

Query: 584 RLDERNSYQVSAGDD----SVSGYLSHTGELADVDLSASTEGSRYSSVSLSARGGATLTP 639
           R+D+   YQ++ G      SV GY SH G LA VDLSA+    +Y+S  LS +GGATLT 
Sbjct: 612 RVDDATHYQLNVGTSDKHTSVDGYYSHDGSLAQVDLSANYHEGQYTSAGLSLQGGATLTA 671

Query: 640 QGGALHRAGTMGGTRLMVDTDGVADVPVRGYGVSTRTNTFGKAVISDIGSYQRTSASVDL 699
           QGGALHR   MGGTRL++D DGVADVPV G G +  TN FGKAV+SD+ +Y R  A +DL
Sbjct: 672 QGGALHRTQNMGGTRLLIDADGVADVPVEGNGAAVYTNMFGKAVVSDVNNYYRNQAYIDL 731

Query: 700 ENLPTNVEATQSVTQLTLTEGAIGYRKLEVIAGAKAMAVLRLPDGSSPPFGALVKNIKQQ 759
             LP N EATQSV Q TLTEGAIGYRK  VI+G KAMAVLRL DGS PPFGA VKN  QQ
Sbjct: 732 NKLPENAEATQSVVQATLTEGAIGYRKFAVISGQKAMAVLRLQDGSHPPFGAEVKNDNQQ 791

Query: 760 DTGVLNDGGSVYLSGIQAGGQMTVSWGGAERCTLTLPNILPADGLTNILNLPCQ 813
             G+++D G+VYL+G++ G  M+V W G   C + LP+ LPAD L N L LPCQ
Sbjct: 792 TVGLVDDDGNVYLAGVKPGEHMSVFWSGVAHCDINLPDPLPAD-LFNGLLLPCQ 844