Pairwise Alignments

Query, 839 a.a., fimbrial assembly protein from Pseudomonas simiae WCS417

Subject, 816 a.a., putative outer membrane protein from Escherichia coli BL21

 Score =  506 bits (1304), Expect = e-147
 Identities = 302/824 (36%), Positives = 462/824 (56%), Gaps = 47/824 (5%)

Query: 6   VQFNTDVLDLGDRTNIDLSQFSRSGFILPGTYPMVIKLNTNTLPEQSVAFYPPDNDLKGS 65
           V+FN +VLD   R  ID+S     G I PG Y + + +N N +       +    D   +
Sbjct: 22  VEFNLNVLDKSMRDRIDISLLKEKGVIAPGEYFVSVAVNNNQISNGQKINWQKKGDK--T 79

Query: 66  QACLTPSIVEQFGLKKEKMTQLSWWKGGQCLDFHSLPGLEAVGDLASASLNVNVPQAYLE 125
             C+  S+V++FGLK +    L   +  +C+DF S P +    D A+  LN+++PQA+L 
Sbjct: 80  IPCINDSLVDKFGLKPDIRQSLP--QIDRCIDFSSRPEMLFNFDQANQQLNISIPQAWLA 137

Query: 126 YTSINWDPPARWDEGISGLMVDYNMTAQSNYQREEGTRN-NVSGNGTVGANAGAWRLRAD 184
           + S NW PP+ W EG++G+++DYN+ A SNY+ ++G+ + N++  GT G NAG+WRLR+D
Sbjct: 138 WHSENWAPPSTWKEGVAGVLMDYNLFA-SNYRPQDGSSSTNLNAYGTTGINAGSWRLRSD 196

Query: 185 WQGRFDGGKTDGNQRMEWSRYYAYRAIPALRAQLVLGEDYLYSDLFDSFRFTGASLKSDE 244
           +Q      +    Q    SR Y +R +P L ++L LGE    S++FD F +TGA+L SD+
Sbjct: 197 YQLNNTDSEDSHEQSGGISRTYLFRPLPQLGSKLTLGETDFSSNIFDGFSYTGAALASDD 256

Query: 245 SQLPPNLRGYAPEVVGVAKTNARVIISQQGRILYETVVAAGPFRIQDLNDAVTGSLDVKI 304
             LP  LRGYAP++ G+A+TNA V ISQ GR++Y+  V  GPF I DLN +V G+LDVK+
Sbjct: 257 RMLPWELRGYAPQISGIAQTNATVTISQSGRVIYQKKVPPGPFIIDDLNQSVQGTLDVKV 316

Query: 305 EEQDGSVHTFQVDTAGVPYLTRPGQVRYKVAAGRP-SNLLYGDDGDPFASGEFSWGVSNG 363
            E+DG V+ FQV  A  P+LTR GQVRYK+AAG+P  ++ +  + + F S E SWG+ + 
Sbjct: 317 TEEDGRVNNFQVSAASTPFLTRQGQVRYKLAAGQPRPSMSHQTENETFFSNEVSWGMLSN 376

Query: 364 WSLFGG-GMGDNNYRALSVGIGRDLLAFGAVSVDATQSSATL-SGEELSGKSYRLQYSKS 421
            SL+GG  +  ++Y + ++GIG+++L  GA+S D T +S+   + ++  G SYR  YSK 
Sbjct: 377 TSLYGGLLLSGDDYHSAAMGIGQNMLWLGALSFDVTWASSHFDTQQDERGLSYRFNYSKQ 436

Query: 422 FDEYDSHVSFAGYRFSEKNYLSMSEYLDARHYGLYDQLGSGGEYGEGGERRKPIGGSKAA 481
            D  +S +S A YRFS++++ S + YLD +    Y+   +  E              K  
Sbjct: 437 VDATNSTISLAAYRFSDRHFHSYANYLDHK----YNDSDAQDE--------------KQT 478

Query: 482 YTATFNKQFRDLGASFYLSYNKQTYWNRPDTQRWNLALSRYFSVGSVKNINASLNLHRSE 541
            + +  +    L  + Y +   QT+WN   +   N+       +G  ++I+ S + + + 
Sbjct: 479 ISLSVGQPITPLNLNLYANLLHQTWWNADASTTANITAGFNVDIGDWRDISISTSFNTTH 538

Query: 542 -DYNTRDNGMTLSVSVPLGRTGTLTTSVDRDRNGIDFSTRYSDRLDERNSYQVSAGDDS- 599
            +   RDN + LS+S+P G  G +   +    +       ++D LDERNS+ +SAG  S 
Sbjct: 539 YEDKDRDNQIYLSISLPFGNGGRVGYDMQNSSHSTTHRMSWNDTLDERNSWGMSAGLQSD 598

Query: 600 -------VSGYLSHTGELADVDLSASTEGSRYSSVSLSARGGATLTPQGGALHRAGTMGG 652
                  VSG   H     + D+S +   + YSSVS S  G  T T  G A HR  +   
Sbjct: 599 RPDNGAQVSGNYQHLSSAGEWDISGTYAANDYSSVSSSWSGSFTATQYGAAFHRRSSTNE 658

Query: 653 TRLMVDTDGVADVPVRGYGVSTRTNTFGKAVISDIGSYQRTSASVDLENLPTNVEATQSV 712
            RLMV TDGVAD+PV+G      TN FG AV+  I SYQ ++ +V++ +LP  V   ++V
Sbjct: 659 PRLMVSTDGVADIPVQGN--LDYTNHFGIAVVPLISSYQPSTVAVNMNDLPDGVTVAENV 716

Query: 713 TQLTLTEGAIGYRKLEVIAGAKAMAVLRLPDGSSPPFGALVKNIKQQDTGV----LNDGG 768
            + T  EGAIGY+ L   +G     ++R   G  PP GA   +I+Q D+G+    + + G
Sbjct: 717 IKETWIEGAIGYKSLASRSGKDVNVIIRNASGQFPPLGA---DIRQDDSGISVGMVGEEG 773

Query: 769 SVYLSGIQAGGQMTVSWGGAERCTLTLPNILPADGLTNILNLPC 812
             +LSG+    + TV WG ++ C+L LP  +  +   N L LPC
Sbjct: 774 HAWLSGVAENQKFTVVWGDSQHCSLHLPEHM--EDTANRLILPC 815