Pairwise Alignments

Query, 192 a.a., fimbrial protein from Pseudomonas simiae WCS417

Subject, 173 a.a., fimbria A protein from Pseudomonas simiae WCS417

 Score = 65.5 bits (158), Expect = 5e-16
 Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 19/166 (11%)

Query: 29  GSGGVLNITGSLYETPCSLAMASQHQTVDLDVVSRNELKHPGDQAMPMAFQIRLQDCRRT 88
           GSG V  I GS++E  CS++  + +QTVDL  ++++EL   G +    AFQI L+ C   
Sbjct: 25  GSGEVRFI-GSIHEGACSISPETANQTVDLGAIAKHELM-AGGRTDGEAFQIDLEGCD-- 80

Query: 89  AGSIRSERSGNLVWSAYEPVLSATFVAPADADDPRLVKVQGVTGMGLQLTDLLGRDVTLG 148
                       V +  +  ++ATF    D   P  + + G         +  G+ V LG
Sbjct: 81  ------------VAALVDKTVTATFTGTGDTTIPGSLALTGAASGAGIFMEHAGKVVVLG 128

Query: 149 SRGEPLFLALGDNTLTW--YVHPTRTSAPLTNGAFRSVVDFRLNYE 192
           +  EP  L  G NTL +  YV    T+AP+  G F ++ +F L+Y+
Sbjct: 129 APTEPQLLQDGGNTLAFNAYVQGHATAAPVP-GTFEAITNFTLDYQ 173