Pairwise Alignments

Query, 86 a.a., RNA-binding protein Hfq from Pseudomonas simiae WCS417

Subject, 117 a.a., RNA-binding protein Hfq from Xanthobacter sp. DMC5

 Score = 74.3 bits (181), Expect = 3e-19
 Identities = 38/77 (49%), Positives = 56/77 (72%), Gaps = 3/77 (3%)

Query: 6   SLQDPYLNTLRKEKVGVSIYLVNGIKLQGTIESFDQFVILL-KNTVSQMVYKHAISTVVP 64
           +LQD +LN +RK K  ++I+LVNG+KLQG +  FD F +LL ++  SQ+VYKHAIST++P
Sbjct: 41  NLQDTFLNHVRKNKTPLTIFLVNGVKLQGVVTWFDNFCVLLRRDGHSQLVYKHAISTIMP 100

Query: 65  VRPIRL--PSAAGDDAA 79
             P++L  P+  G + A
Sbjct: 101 GHPVQLFDPTDDGGEKA 117