Pairwise Alignments

Query, 86 a.a., RNA-binding protein Hfq from Pseudomonas simiae WCS417

Subject, 81 a.a., RNA-binding protein Hfq from Variovorax sp. SCN45

 Score =  115 bits (287), Expect = 1e-31
 Identities = 56/78 (71%), Positives = 66/78 (84%)

Query: 2  SKGHSLQDPYLNTLRKEKVGVSIYLVNGIKLQGTIESFDQFVILLKNTVSQMVYKHAIST 61
          +KG  LQDP+LNTLR+E V VSIYLVNGIKLQG IESFDQ+V+LL+NTV+QMVYKHAIST
Sbjct: 3  NKGQLLQDPFLNTLRREHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAIST 62

Query: 62 VVPVRPIRLPSAAGDDAA 79
          +VP R +   +A  DDAA
Sbjct: 63 IVPGRAVNFSAAENDDAA 80