Pairwise Alignments

Query, 525 a.a., transposase from Pseudomonas simiae WCS417

Subject, 391 a.a., Mobile element protein from Variovorax sp. SCN45

 Score =  375 bits (963), Expect = e-108
 Identities = 198/386 (51%), Positives = 244/386 (63%), Gaps = 12/386 (3%)

Query: 146 RIGEDVSEKLDYTPGVFTVERHIRGKWVCDDCETLIQAPVPAQIIDKGIPTAGLLAQVMI 205
           R+GEDVSE+LD  P  F V RHI GKW C  C+ L+Q P   QIID G+P AGL+A  M+
Sbjct: 3   RVGEDVSERLDVIPAEFFVHRHIYGKWACRCCQCLVQEPAAPQIIDGGMPAAGLVAHTMV 62

Query: 206 AKYGDHLPLYRQEQIFGRAGLAIPRSTLAQWVGTCGVQLQPLVDALRGVVLGHNVVHADE 265
           + + DHLP YR E I  R+G+  PRSTLA W G  G  L PL DA +  VL   V+HADE
Sbjct: 63  SHFVDHLPYYRLESINARSGVHTPRSTLASWSGRGGAALVPLYDAHKRFVLSAAVLHADE 122

Query: 266 TPVQVLMPGAKKTHRAYVWAYASSAFADIKAVVYDFTPSRAGEHARRFL---------QD 316
           TPV +L PGA KT RAYVW YA  AF  +  V+YDF   R  ++   FL           
Sbjct: 123 TPVAMLDPGAGKTKRAYVWTYARGAFDAVPGVIYDFCAGRGAQYPVAFLGPEDDRRSDPG 182

Query: 317 WKGKLVCDDFGGYKASFSL--GVTEIGCMAHARRKFFEL-HATNKSQLAEQALRYIQVLY 373
           W+G LV D++  Y        G    GC+AHARRK+ EL     KS +A++ALR I  +Y
Sbjct: 183 WRGTLVRDEYAAYDKVMVAQPGRIPAGCLAHARRKYDELLRDAGKSAVADEALRRIAQIY 242

Query: 374 EIEREVRDLEPDLRRRIRQEKAAPAMDVLHTWMIAQRERMHDGVAIAKAFDYSLKRWTAL 433
            +ERE+  L    R   RQ  A P  + LH+W+  +R R+ DG A AKA +YSL  W+AL
Sbjct: 243 RLERELAALTSQERLTRRQRDAKPLWEDLHSWLRLERGRVPDGSATAKALNYSLNAWSAL 302

Query: 434 SRYLDDGAVPIDNNHAEQQIRPWALGRKNWLYAGSLRSGQRAAALMSLIQSAKLNGHDPY 493
           ++ L DG V +DNNH E  IRPWA GR+ WL+AGS  +GQRAA +MSL++SAKL GHDP+
Sbjct: 303 TQNLLDGDVNVDNNHCENLIRPWAQGRRAWLFAGSELAGQRAAVVMSLVRSAKLQGHDPW 362

Query: 494 AYLKDVFTRLPTQRASEIAELLPHNW 519
           AYLKDV TRLPT   S I ELLPHNW
Sbjct: 363 AYLKDVLTRLPTHLNSRIDELLPHNW 388