Pairwise Alignments

Query, 525 a.a., transposase from Pseudomonas simiae WCS417

Subject, 524 a.a., Mobile element protein from Variovorax sp. SCN45

 Score =  216 bits (551), Expect = 1e-60
 Identities = 146/468 (31%), Positives = 231/468 (49%), Gaps = 20/468 (4%)

Query: 69  FAKRSEQHSPAQAGLL---DDLIDTDIAAIEAELEALQAKPASIETKQKPKRTALPPQFP 125
           FA +SE     Q  L     + +      + AE +  ++   +   ++K  R  L P  P
Sbjct: 53  FAAKSEARGSEQKDLFLNEAEALAPTAQTLPAESDDEESTTVAGHQRKKRGRKPLDPALP 112

Query: 126 RTLIHHEPDNTQCAC---GCALKRIGEDVSEKLDYTPGVFTVERHIRGKWVCDDCETLIQ 182
           R ++ HE   ++  C   G AL  IG +VSE++   P    V +H R K+ C  C+  ++
Sbjct: 113 RDIVRHELPESERVCAHDGHALVEIGAEVSEQMHVIPEQVRVLQHHRIKYACPCCDLSLK 172

Query: 183 -APVPAQIIDKGIPTAGLLAQVMIAKYGDHLPLYRQEQIFGRAGLAIPRSTLAQWVGTCG 241
            AP PA+II +G+ T    A V+  KY   +PLYR   +  R G  I  +TLA  V   G
Sbjct: 173 VAPTPARIIPRGLLTEEAQAWVITGKYQFGMPLYRTAVLLRRFGGNIVSNTLAAGVVRIG 232

Query: 242 VQLQPLVDALRGVVLGHNVVHADETPVQVLM-PGAKKTHRAYVWAYASSAFADIKAVVYD 300
           + +QP+++ LR  +L  ++++ DET VQVL  PG K   ++Y+WA  + +   ++   Y 
Sbjct: 233 LAVQPVINLLRDHLLDSDLIYGDETTVQVLKEPGRKAQTKSYMWAQMNGSGPPVRLFAY- 291

Query: 301 FTPSRAGEHARRFLQDWK--GKLVCDDFGGYKA-SFSLGVTEIGCMAHARRKFFELH--- 354
             P R   HA +     +     V D +  Y   +   G+T +GC  HARR F +     
Sbjct: 292 -APGRGAMHADKLYAGIRRGATFVSDGYQVYDGIAAGHGLTHLGCWVHARRPFVKAEEAI 350

Query: 355 ---ATNKSQLAEQALRYIQVLYEIEREVRDLEPDLRRRIRQEKAAPAMDVLHTWMIAQRE 411
              A +  QLA + ++ I  LY  E       P  R R+R+  +A  +  +   ++    
Sbjct: 351 PKAARSPDQLATRFIKLIGKLYRAEARAEKWTPQRRGRLRKRYSASVVSNIEQLLLTNLH 410

Query: 412 RMHDGVAIAKAFDYSLKRWTALSRYLDDGAVPIDNNHAEQQIRPWALGRKNWLYAGSLRS 471
            +     + +A  Y   +W  L R+L+ G+ P+D+N  E  IRP+ +GRK WL+A ++  
Sbjct: 411 AVAPTSLLGEALHYLHGQWPKLIRFLESGSWPLDSNPVENAIRPFVVGRKGWLFADTVGG 470

Query: 472 GQRAAALMSLIQSAKLNGHDPYAYLKDVFTRLP-TQRASEIAELLPHN 518
              +A L SLI++AK NG +PY YL  +F +LP  Q A +   LLP N
Sbjct: 471 ANASANLYSLIETAKANGIEPYRYLVALFKKLPLAQTADDYEALLPWN 518