Pairwise Alignments

Query, 525 a.a., transposase from Pseudomonas simiae WCS417

Subject, 511 a.a., Mobile element protein from Sphingobium sp. HT1-2

 Score =  324 bits (830), Expect = 5e-93
 Identities = 188/501 (37%), Positives = 276/501 (55%), Gaps = 16/501 (3%)

Query: 33  VDTLGKTVETMGRKIHRDRTVIEKLTHEIAQLKRFKFAKRSEQHSPAQAGLLDDLIDTDI 92
           VD   +  E       RD T+I+ L  ++AQL+R  F + SE+ S     L  + ++  +
Sbjct: 9   VDKDARIAELEAALAARD-TLIDTLRFQLAQLRRLTFGQSSEKLS-----LQLEQLELTL 62

Query: 93  AAIEAELEALQAKPASIETKQKPKRT-ALPPQFPRTLIHHEPDNTQC---ACGCALKRIG 148
             +E E E    +    + +++P    ALP   PR     EP+   C   +CG AL+ +G
Sbjct: 63  EELEGESELADIRKVQADQRERPAPVRALPAHLPRAERRIEPEAGTCTCPSCGGALRPLG 122

Query: 149 EDVSEKLDYTPGVFTVERHIRGKWVCDDCETLIQAPVPAQIIDKGIPTAGLLAQVMIAKY 208
           +D  E LD  P  + V R +R K+ C  CE ++QAP P + I +G  +   LA V++AK+
Sbjct: 123 QDSDEMLDVAPVQWRVIRTVRPKYSCRSCEQIVQAPAPVKAIARGKASFATLAHVVVAKF 182

Query: 209 GDHLPLYRQEQIFGRAGLAIPRSTLAQWVGTCGVQLQPLVDALRGVVLGHNVVHADETPV 268
             HLPLYRQ ++    GL I RSTLA W       L P+V  ++   +    +H D+TPV
Sbjct: 183 DHHLPLYRQAEMMAAQGLDIDRSTLAGWAAQAAHLLDPIVSRIQEEGIKAGKIHVDDTPV 242

Query: 269 QVLMPGAKKTHRAYVWAYA----SSAFADIKAVVYDFTPSRAGEHARRFLQDWKGKLVCD 324
            +LMPG  KT +A +W Y     ++  + +    Y FTP R+G H +  L+D+ G L  D
Sbjct: 243 PMLMPGKGKTVQARLWTYVVDDRAAGASTLALAWYRFTPDRSGVHPQSELKDFTGLLQAD 302

Query: 325 DFGGY-KASFSLGVTEIGCMAHARRKFFELHATNKSQLAEQALRYIQVLYEIEREVRDLE 383
            + G+ K      + E+ C AH RRK FE H T+ + L    L  I  LY IE E+R   
Sbjct: 303 AYAGFDKLYRGNRIREVACWAHFRRKIFENHTTSPTSLTSNLLDRIAALYRIEEEIRGQP 362

Query: 384 PDLRRRIRQEKAAPAMDVLHTWMIAQRERMHDGVAIAKAFDYSLKRWTALSRYLDDGAVP 443
           PD RRR RQ+++ P ++ L + +      +     +AKA +Y  KRW AL+RY+D+G   
Sbjct: 363 PDQRRRHRQDRSRPQVNELRSVIDDALRHLSPKSNMAKALNYGRKRWDALTRYIDEGVAE 422

Query: 444 IDNNHAEQQIRPWALGRKNWLYAGSLRSGQRAAALMSLIQSAKLNGHDPYAYLKDVFTRL 503
           IDNN AE+ IRP A+GRKNW++AGS   G+RAAA+ S+I++AKLNG +P AY+ DV  ++
Sbjct: 423 IDNNIAERAIRPVAIGRKNWIFAGSKAGGERAAAIYSVIETAKLNGIEPQAYIADVIEKI 482

Query: 504 PTQ-RASEIAELLPHNWTHLR 523
                A+   EL+P NW   R
Sbjct: 483 AGDWPATRWDELMPWNWQECR 503