Pairwise Alignments

Query, 525 a.a., transposase from Pseudomonas simiae WCS417

Subject, 634 a.a., Transposase from Sphingobium sp. HT1-2

 Score =  294 bits (753), Expect = 6e-84
 Identities = 190/530 (35%), Positives = 273/530 (51%), Gaps = 33/530 (6%)

Query: 13  EQLRALATQVMQRVETLDHQVDTLGKTVETMGRKIHRDRTVIEKLTHEIAQLKRFKFAKR 72
           E LRAL +  ++R +      D   +    M R+   +  +I  L  +IA+L+R ++   
Sbjct: 16  EALRALLSAALERAD------DAEARLANAMARESATE-AMIAHLKLQIAKLRREQYGAS 68

Query: 73  SEQHSPAQAGLLDDLIDTDIAAIE----AELEALQAKPASIETKQKPKRTALPPQFPRTL 128
           +E+       L   L D +  A E    AE+ A +    +   +++P R   P   PR  
Sbjct: 69  AERSRRLLDQLELQLEDLEADACEDDLAAEVAAARTADVAAFARKRPSRKPFPEHLPRER 128

Query: 129 IHHEPDNTQCACGCA-LKRIGEDVSEKLDYTPGVFTVERHIRGKWVCDDCETLIQAPVPA 187
           +      +  ACG A L ++GEDV+E L+  P  + V + +R K+ C DCE + Q P P 
Sbjct: 129 VVIPAPCSCPACGGARLSKLGEDVTETLEVIPRQWKVIQTVREKFSCRDCEAITQPPAPF 188

Query: 188 QIIDKGIPTAGLLAQVMIAKYGDHLPLYRQEQIFGRAGLAIPRSTLAQWVGTCGVQLQPL 247
            ++ +G      LA ++  KYG H PL RQ + F R G+ +  STLA  VG     L PL
Sbjct: 189 HVVPRGWAGPSFLAMLLFEKYGQHQPLNRQAERFAREGVPLSTSTLADQVGAASFALMPL 248

Query: 248 VDALRGVVLGHNVVHADETPVQVLMPGAKKTHRAYVWAYASSAFA--DIKAVVYDFTPSR 305
              +   VL    +H D+T V VL  G   T R +V+      FA  D  A ++ ++  R
Sbjct: 249 YLRIEAHVLAARRLHGDDTTVPVLATGKTDTARLWVYVRDDRPFAGSDPPAALFHYSRDR 308

Query: 306 AGEHARRFLQDWKGKLVCDDFGGYKASFSLG-----VTEIGCMAHARRKFFELH-----A 355
            GEH R  L  W G L  D +GGY   ++ G     V E GC AHARRKFFEL      A
Sbjct: 309 RGEHPRAHLASWAGILQADAYGGYNELYAPGRQPAPVIEAGCFAHARRKFFELADVEAAA 368

Query: 356 TNKSQ---------LAEQALRYIQVLYEIEREVRDLEPDLRRRIRQEKAAPAMDVLHTWM 406
             KS+         +A +A++ +  L+EIER +     + R  +RQ+ +AP M  LH W+
Sbjct: 369 RRKSRGQRTGMIYPIALEAVQRLDALFEIERGINGKAAEERVAVRQDFSAPLMTDLHAWL 428

Query: 407 IAQRERMHDGVAIAKAFDYSLKRWTALSRYLDDGAVPIDNNHAEQQIRPWALGRKNWLYA 466
            AQ  ++     +AKA +Y L+RW A +R+L DG + + NN AE+ +R   LGRK WL+ 
Sbjct: 429 TAQLAKLSRSHDLAKAINYMLRRWDAFTRFLGDGRICLTNNAAERALRCVPLGRKAWLFC 488

Query: 467 GSLRSGQRAAALMSLIQSAKLNGHDPYAYLKDVFTRLPTQRASEIAELLP 516
           GS R GQRAA L SLIQ+A+LN  DP A+L DV  R+     + I ELLP
Sbjct: 489 GSDRGGQRAAVLYSLIQTARLNDVDPQAWLADVLARIAEHPVNRIDELLP 538