Pairwise Alignments

Query, 525 a.a., transposase from Pseudomonas simiae WCS417

Subject, 537 a.a., Mobile element protein from Sphingobium sp. HT1-2

 Score =  300 bits (769), Expect = 7e-86
 Identities = 191/508 (37%), Positives = 267/508 (52%), Gaps = 27/508 (5%)

Query: 34  DTLGKTVETMGRKIHRDRTVIEKLTHEIAQLKRFKFAKRSEQHSPAQAGLLDDLIDTDIA 93
           D L   VE +   +  +R    +L H +  + R  F KRSE+    Q  L   L D ++A
Sbjct: 18  DELPDNVEQLKAMVLAERARAARLEHILKLINRSTFGKRSEKLPVDQLALT--LEDQNVA 75

Query: 94  AIEAELEALQAKPASIETKQ--KPKR--------TALPPQFPRTLIHHEPDNTQCACGCA 143
             EA+   LQ K A    +   +P+R         +LP   PR     EP N +CACG  
Sbjct: 76  LGEAD--GLQDKAAEEAGRYGLRPRRRRAPDAERASLPAHLPRFETVIEPKNLECACGGT 133

Query: 144 LKRIGEDVSEKLDYTPGVFTVERHIRGKWVCDDCETLI-QAPVPAQIIDKGIPTAGLLAQ 202
           L +IGED SE+LD  P    V   IR ++ C  C   + QA  PA ++  G+PT  L+A 
Sbjct: 134 LHKIGEDRSERLDIIPAQHRVMVTIRPRYACRCCSDGVRQASAPAHVVPGGLPTEALIAD 193

Query: 203 VMIAKYGDHLPLYRQEQIFGRAGLAIPRSTLAQWVGTCGVQLQPLVDALRGVVLGHNVVH 262
           V+I KY DHLPLYRQ +IF R G+ I R+T+A WVG     L P+ D +R   L    + 
Sbjct: 194 VLINKYCDHLPLYRQSKIFARQGIEISRATMANWVGRGIAALMPITDRMRADALARARLF 253

Query: 263 ADETPVQVLMPGAKKTHRAYVWAYASSAFA----DIKAVVYDFTPSRAGEHARRFLQDWK 318
            DET V+VL PG  KT   Y+W       A    D    +Y + P R    A++ L  ++
Sbjct: 254 VDETTVKVLAPGTGKTKTGYMWVIVCDDRAHGGVDPPLALYTYMPGRGKMWAKQLLGSYQ 313

Query: 319 GKLVCDDFGGYKA-----SFSLGVTEIGCMAHARRKFFELHATNKSQLAEQALRYIQVLY 373
           G L  D +  Y           GVT+  C AH RR F +  A + + +A+ AL+ I  +Y
Sbjct: 314 GILQVDAWQAYDQFGKDDGADTGVTKSYCWAHLRRGFVD--AGSDAPVAQDALQRIAEIY 371

Query: 374 EIEREVRDLEPDLRRRIRQEKAAPAMDVLHTWMIAQRERMHDGVAIAKAFDYSLKRWTAL 433
            IE+E+R    + R  +RQE+  P ++ LH W  A   RM  G A + A  Y+LKRW   
Sbjct: 372 GIEKEIRGRTAEERLAVRQERTRPLVEKLHAWFAATAPRMMAGSATSDAMKYALKRWAGF 431

Query: 434 SRYLDDGAVPIDNNHAEQQIRPWALGRKNWLYAGSLRSGQRAAALMSLIQSAKLNGHDPY 493
           +R+LDDG + IDNN AE+ IRP  L RKN L+ G     +  AA+ SL+++ K+   +PY
Sbjct: 432 TRFLDDGRIEIDNNTAERAIRPVTLQRKNALFTGHQLGAENWAAISSLVETCKMLDINPY 491

Query: 494 AYLKDVFTRLPTQRASE-IAELLPHNWT 520
           AYL DV TR+ T+  ++ I +LLP+ WT
Sbjct: 492 AYLCDVLTRIITRADTDPIDDLLPYCWT 519