Pairwise Alignments

Query, 525 a.a., transposase from Pseudomonas simiae WCS417

Subject, 524 a.a., Mobile element protein from Sphingobium sp. HT1-2

 Score =  258 bits (659), Expect = 4e-73
 Identities = 180/517 (34%), Positives = 257/517 (49%), Gaps = 17/517 (3%)

Query: 12  PEQLRALATQVMQRVETLDHQVDTLGKTVETMGRKIHRDRTVIEKLTHEIAQLKRFKFAK 71
           PE + AL   V+++   L  +       +  +          IE+L   I    R +F  
Sbjct: 8   PEDIDALRALVLEQSRILAEERAAAEVRLAELNVAKGEADVEIERLQSIIKAFMRHRFGS 67

Query: 72  RSEQHSPAQAGLLDDLIDTDIAAIEAELEALQAKPASI-ETKQKPKRTALPPQFPRTLIH 130
           RSEQ    Q  L   L D +IA   A        P S  +  +K  R +LP    R    
Sbjct: 68  RSEQLDADQLQL--GLEDVEIALGHARAAREAVAPRSRGDQPRKTNRGSLPAHLERIEQI 125

Query: 131 HEPDNTQCACGCA--LKRIGEDVSEKLDYTPGVFTVERHIRGKWVCDDCE-TLIQAPVPA 187
            + D+  C C C   L +IGEDV+E+LD  P  F V    R ++ C  CE  ++QAP PA
Sbjct: 126 VDLDDKACPC-CKGPLHQIGEDVAERLDVVPTTFRVLVTRRPRYGCRSCEGAIVQAPAPA 184

Query: 188 QIIDKGIPTAGLLAQVMIAKYGDHLPLYRQEQIFGRAGLAIPRSTLAQWVGTCGVQLQPL 247
           +II+ GIPT  L+AQV+++KY DH+PLYRQ QI+ R  + + RSTLA WVG     L+PL
Sbjct: 185 RIIEGGIPTEALIAQVLVSKYADHVPLYRQAQIYARQDIRLDRSTLADWVGRAAWYLRPL 244

Query: 248 VDALRGVVLGHNVVHADETPVQVLMPGAKKTHRAYVWAYASS----AFADIKAVVYDFTP 303
            D     +     + ADET   VL PG  +T    +WAYA        A    V Y +  
Sbjct: 245 RDRTLEELRRSKRLFADETTAPVLDPGRGRTKTGQLWAYARDDRPCGGAGPPMVAYIYAA 304

Query: 304 SRAGEHARRFLQDWKGKLVCDDFGGYKASFSLGVTEIG---CMAHARRKFFELHATNKSQ 360
            R  E     L D+ G L  D +GGY A       ++    C +H RRKF++L A+  S 
Sbjct: 305 DRKAERPDIHLGDFAGILQVDGYGGYTALAKRRGQQLSLAFCWSHVRRKFYDLAAS--SP 362

Query: 361 LAEQALRYIQVLYEIEREVRDLEPDLRRRIRQEKAAPAMDVLHTWMIAQRERMHDGVAIA 420
           +A + LR I +LY IE EVR    + RR  R E++   ++ L  ++  +  ++     +A
Sbjct: 363 VATEILRRIAMLYAIEDEVRGSAAEQRRLQRAERSRIIVEDLKLYLDGRLRQISAKSKLA 422

Query: 421 KAFDYSLKRWTALSRYLDDGAVPIDNNHAEQQIRPWALGRKNWLYAGSLRSGQRAAALMS 480
           +A  Y+  RW  L R++DDG + +D N  E+ IRP AL RKN L+AGS   G   A + +
Sbjct: 423 EAIRYATSRWAGLVRFIDDGRIELDTNTVERSIRPLALNRKNALFAGSDEGGDNWAVIAT 482

Query: 481 LIQSAKLNGHDPYAYLKDVFTRLPT-QRASEIAELLP 516
           LI++ KL   +P  +L    T L     A+ + EL+P
Sbjct: 483 LIENCKLGAINPNDWLTQTLTALANGHPANRVHELMP 519