Pairwise Alignments

Query, 525 a.a., transposase from Pseudomonas simiae WCS417

Subject, 511 a.a., transposase from Pseudomonas putida KT2440

 Score =  754 bits (1947), Expect = 0.0
 Identities = 369/519 (71%), Positives = 415/519 (79%), Gaps = 11/519 (2%)

Query: 1   MISPPSLDQLNPEQLRALATQVMQRVETLDHQVDTLGKTVETMGRKIHRDRTVIEKLTHE 60
           M   P+LDQ+ PEQLRALA Q +Q           L   VE M RKI  D  +IE+   E
Sbjct: 1   MTFSPNLDQMTPEQLRALAAQALQ-----------LQSQVEAMSRKIQNDEILIEQFKFE 49

Query: 61  IAQLKRFKFAKRSEQHSPAQAGLLDDLIDTDIAAIEAELEALQAKPASIETKQKPKRTAL 120
           IA LKR KFAKRSEQ SPAQ+ LLDDL+DTD+ AIEAEL+ L       E +Q PKR  L
Sbjct: 50  IALLKRHKFAKRSEQISPAQSNLLDDLLDTDLEAIEAELKQLLPDAPQAEPRQSPKRAPL 109

Query: 121 PPQFPRTLIHHEPDNTQCACGCALKRIGEDVSEKLDYTPGVFTVERHIRGKWVCDDCETL 180
           PPQFPRT+I HEP+NTQC CGC L+RIGEDVSEKLDYTPGVFTVE+H+RGKW C  CETL
Sbjct: 110 PPQFPRTVIRHEPENTQCVCGCQLQRIGEDVSEKLDYTPGVFTVEQHVRGKWACRQCETL 169

Query: 181 IQAPVPAQIIDKGIPTAGLLAQVMIAKYGDHLPLYRQEQIFGRAGLAIPRSTLAQWVGTC 240
           IQAPVPAQ+IDKGIPT GLLA VM+AK+ DHLPLYRQE+IFGRAGLAI RSTLAQWVG  
Sbjct: 170 IQAPVPAQVIDKGIPTTGLLAHVMVAKFADHLPLYRQEKIFGRAGLAIARSTLAQWVGQT 229

Query: 241 GVQLQPLVDALRGVVLGHNVVHADETPVQVLMPGAKKTHRAYVWAYASSAFADIKAVVYD 300
           GV+LQPLVDALR  VL   V+HADETPVQ+L PG KKTHRAYVWAY+++ F+ +KAVVYD
Sbjct: 230 GVRLQPLVDALREAVLNQGVIHADETPVQMLAPGEKKTHRAYVWAYSTTPFSGLKAVVYD 289

Query: 301 FTPSRAGEHARRFLQDWKGKLVCDDFGGYKASFSLGVTEIGCMAHARRKFFELHATNKSQ 360
           F+PSRAGEHAR FL DW GKLVCDDF GYKA F  G+TEIGCMAHARRKFF+LH  NKSQ
Sbjct: 290 FSPSRAGEHARNFLGDWNGKLVCDDFAGYKAGFEQGITEIGCMAHARRKFFDLHVANKSQ 349

Query: 361 LAEQALRYIQVLYEIEREVRDLEPDLRRRIRQEKAAPAMDVLHTWMIAQRERMHDGVAIA 420
           LAEQAL  I  LYE+ER+ RD+  + R RIRQE A P +  LH WM+AQR+ + +G A A
Sbjct: 350 LAEQALHSISGLYEVERQARDMSDEERWRIRQELAVPILKKLHDWMLAQRDLVPNGSATA 409

Query: 421 KAFDYSLKRWTALSRYLDDGAVPIDNNHAEQQIRPWALGRKNWLYAGSLRSGQRAAALMS 480
           KA DYSLKRW AL+RYLDDGAVPIDNN  E QIRPWALGR NWL+AGSLRSG+RAAA+MS
Sbjct: 410 KALDYSLKRWVALTRYLDDGAVPIDNNQVENQIRPWALGRSNWLFAGSLRSGKRAAAIMS 469

Query: 481 LIQSAKLNGHDPYAYLKDVFTRLPTQRASEIAELLPHNW 519
           LIQSA++NGHDPYAYLKDV TRLPTQRASEI +LLPH W
Sbjct: 470 LIQSARMNGHDPYAYLKDVLTRLPTQRASEIGQLLPHQW 508