Pairwise Alignments

Query, 525 a.a., transposase from Pseudomonas simiae WCS417

Subject, 516 a.a., Transposase and inactivated derivatives from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  223 bits (569), Expect = 1e-62
 Identities = 162/529 (30%), Positives = 257/529 (48%), Gaps = 39/529 (7%)

Query: 7   LDQLNPEQLRALATQVMQRVETLDHQVDTLGKTVETMGRKIHRDRTVIEKLTHE------ 60
           LDQL   +L AL  +  Q+V   +  +               ++R + EK  +E      
Sbjct: 5   LDQLTKAELLALLQKSEQQVADRERVI-------------AEKERILAEKEAYEKQLLAL 51

Query: 61  IAQLKRFKFAKRSEQHSPAQAGLLDDLIDTDIAAIEAELEALQAKPASIETKQKPKRTA- 119
           I + KR  FA++ E+        LD L +      + + E    K   I  K++P  T  
Sbjct: 52  IEKFKRMAFAQKRERFE-GNKDQLDLLFEPTQEQEQQQQEGFSRKVEYIR-KKRPAHTGR 109

Query: 120 --LPPQFPRTLIHHEPDNTQCACGCALKRIGEDVSEKLDYTPGVFTVERHIRGKWVCDDC 177
             LP   P   I   P+       C    IG++V+E+LDY P  +   R+IR K+   D 
Sbjct: 110 QPLPDHLPVEEIEIHPEGDLSGMEC----IGKEVTEELDYIPAQYIRRRYIRYKYAPKDR 165

Query: 178 ETLIQAPV---PAQIIDKGIPTAGLLAQVMIAKYGDHLPLYRQEQIFGRAGLAIPRSTLA 234
            +     +   P + I KGIP  GLL  ++  KY +H+PLYRQ Q F R  + I  +TL 
Sbjct: 166 YSSAGVKIGLLPERAIPKGIPGYGLLTDILTRKYLEHMPLYRQAQRFKREKIPIAPTTLE 225

Query: 235 QWVGTCGVQLQPLVDALRGVVLGHNVVHADETPVQVLMPGAKKT-HRAYVWAYASSAFAD 293
            WV     +L+PL D+L         +  DE+ ++VL    K   H  Y W Y +     
Sbjct: 226 GWVKQGLEKLEPLYDSLVADTKAMGYLMVDESTIRVLDSDKKGACHTGYYWVYHNPLE-- 283

Query: 294 IKAVVYDFTPSRAGEHARRFLQDWKGKLVCDDFGGYKA-SFSLGVTEIGCMAHARRKFFE 352
              V++D+ P+R+       L++++G L  D +  Y+  + +  +T + C AHARRK+FE
Sbjct: 284 -NTVLFDYQPTRSKGGPSAILENFQGYLQSDGYAVYEHYAANKEITHLACWAHARRKYFE 342

Query: 353 LHATNKSQLAEQALRYIQVLYEIEREVR--DLEPDLRRRIRQEKAAPAMDVLHTWMIAQR 410
               NK +LA +AL +I  LY++E++ +  +L  + R+++R ++A P ++ +  W+  Q 
Sbjct: 343 TLVENK-KLASEALGFIGKLYDVEKKAKKLNLSAEDRKKLRLDEALPVINKMSEWIKKQL 401

Query: 411 ERMHDGVAIAKAFDYSLKRWTALSRYLDDGAVPIDNNHAEQQIRPWALGRKNWLYAGSLR 470
            +      + KA  YS  RW  LS YL DG + IDNN  E++IR   +GRKN+L+AGS +
Sbjct: 402 PKALPKSGLRKALFYSANRWAELSNYLYDGELEIDNNLVEREIRSMVVGRKNYLFAGSHK 461

Query: 471 SGQRAAALMSLIQSAKLNGHDPYAYLKDVFTRLPTQRASEIAELLPHNW 519
           + QR A + S     KL+  +P   L+     + T     I +L P N+
Sbjct: 462 AAQRTAMIYSFFGICKLHDVNPQQCLEHALRNIMTINHKNIRDLYPQNF 510