Pairwise Alignments

Query, 525 a.a., transposase from Pseudomonas simiae WCS417

Subject, 517 a.a., Transposase and inactivated derivatives from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  231 bits (588), Expect = 6e-65
 Identities = 168/533 (31%), Positives = 260/533 (48%), Gaps = 46/533 (8%)

Query: 7   LDQLNPEQLRALATQVMQRVETLDHQVDTLGKTVETMGRKIHRDRTVIEKLTHE------ 60
           LDQL   +L AL  +  Q+V   +  +               ++R + EK  +E      
Sbjct: 5   LDQLTKAELLALLQKSEQQVADRERVI-------------AEKERILAEKEAYEKQLLAM 51

Query: 61  IAQLKRFKFAKRSEQHSPAQAGLLDDL---IDTDIAAIEAELEALQAKPASIETKQKPKR 117
           I + KR  FA++ E+      G  D +    + D    + + E    K   I  K++P  
Sbjct: 52  IEKFKRMSFAQKRERF----LGNKDQMALPFEPDQEQEQQQQEGFSRKVEYIR-KKRPAH 106

Query: 118 TA---LPPQFPRTLIHHEPDNTQCACGCALKRIGEDVSEKLDYTPGVFTVERHIRGKWVC 174
           T    LP   P   I   P+       C    IG++V+E+LDY P  +   R+IR K+  
Sbjct: 107 TGRQPLPDHLPVEEIEIHPEGDLSGMEC----IGKEVTEELDYIPAQYIRRRYIRYKYAP 162

Query: 175 DDCETLIQAPV---PAQIIDKGIPTAGLLAQVMIAKYGDHLPLYRQEQIFGRAGLAIPRS 231
            D  +     +   P + I KGIP  GLL  ++  KY +H+PLYRQ Q F R  + I  +
Sbjct: 163 KDRYSSAGVKIGLLPERAIPKGIPGYGLLTDILTRKYLEHMPLYRQAQRFKREKIPIAPT 222

Query: 232 TLAQWVGTCGVQLQPLVDALRGVVLGHNVVHADETPVQVLMPGAKK--THRAYVWAYASS 289
           TL  WV     +L+PL D L         +  DE+ ++VL    KK   H  Y W Y + 
Sbjct: 223 TLEGWVKQGLEKLEPLYDCLVDDTKAMGYLMVDESTIRVLDSDNKKGACHTGYYWVYHNP 282

Query: 290 AFADIKAVVYDFTPSRAGEHARRFLQDWKGKLVCDDFGGYKASFS-LGVTEIGCMAHARR 348
                  V++D+ P+R+ E     L++++G L  D +G Y+   +   VT + C AHARR
Sbjct: 283 LE---NTVLFDYRPTRSKEGPSAILENFQGYLQSDGYGVYEHYVANKQVTHLACWAHARR 339

Query: 349 KFFELHATNKSQLAEQALRYIQVLYEIEREVR--DLEPDLRRRIRQEKAAPAMDVLHTWM 406
           KFFE    NK + A +AL +I  LY++ER+ +  +L  + R+++R ++A P ++ +  W+
Sbjct: 340 KFFETLVENK-KAASEALGFIGKLYDVERKAKKENLSAEDRKKLRLDEALPVINKMSEWI 398

Query: 407 IAQRERMHDGVAIAKAFDYSLKRWTALSRYLDDGAVPIDNNHAEQQIRPWALGRKNWLYA 466
             Q  +      + KA  YS  RW  LS YL DG + IDNN  E++IR   +GRKN+L+A
Sbjct: 399 KKQLPKALPKSGLRKALFYSANRWAELSNYLYDGKLEIDNNPVEREIRSMVVGRKNYLFA 458

Query: 467 GSLRSGQRAAALMSLIQSAKLNGHDPYAYLKDVFTRLPTQRASEIAELLPHNW 519
           GS ++ QRAA + S     KL+  +P  +L+     + T     I +L P N+
Sbjct: 459 GSHKAAQRAAMIYSFFGICKLHDVNPQQWLEHALRNIMTTNHKNIRDLYPQNF 511