Pairwise Alignments

Query, 525 a.a., transposase from Pseudomonas simiae WCS417

Subject, 520 a.a., Transposase and inactivated derivatives from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  234 bits (597), Expect = 6e-66
 Identities = 170/489 (34%), Positives = 238/489 (48%), Gaps = 26/489 (5%)

Query: 45  RKIHRDRTVIEKLTHEIAQLKRFKFAKRSEQHSPAQAGLLDDLIDTDIAAIEAELEALQA 104
           R++      IE+L   + +  R  FA++ E+   A    L      D    E + E L  
Sbjct: 32  RRLEEKEQEIERLRGIVDRFARLAFAQKRERFE-ANRDQLPLPFGADPVKEEQQGEELGK 90

Query: 105 KPASIETKQK----PKRTALPPQFP--RTLIHHEPDNTQCACGCALKRIGEDVSEKLDYT 158
           K   I  KQ     P R  LP   P     IH E D ++  C      IG +V+E+LDY 
Sbjct: 91  KIGYIRKKQPRESHPGRHPLPGHLPVEEIEIHPEVDLSEMEC------IGSEVTEELDYV 144

Query: 159 PGVFTVERHIRGKWVCDDCETLIQAPV---PAQIIDKGIPTAGLLAQVMIAKYGDHLPLY 215
           P    V R+IR K+V        +  +   P++ I+KGI   GLLA ++  KY DHLPLY
Sbjct: 145 PAKLVVRRYIRYKYVPKQKTGSTKVEIGTLPSRFIEKGIAGTGLLASILTDKYVDHLPLY 204

Query: 216 RQEQIFGRAGLAIPRSTLAQWVGTCGVQLQPLVDALRGVVLGHNVVHADETPVQVLMPGA 275
           RQ Q F R  + I  ST+  WV     +L+ L D L         +  DE+ ++VL  G 
Sbjct: 205 RQLQRFKREKIPIAASTMDGWVRQSLDRLEILYDCLLEDTRSKGYLQVDESTIKVL-DGE 263

Query: 276 KK--THRAYVWAYASSAFADIKAVVYDFTPSRAGEHARRFLQDWKGKLVCDDFGGYKASF 333
           KK   H  Y W Y +        V++D+   R G+   R L+D++G L  D +  Y+   
Sbjct: 264 KKQAAHLGYYWVYHNPMDG---TVLFDYQKGRGGKAPERMLKDFRGYLQTDGYKVYECYG 320

Query: 334 SLG-VTEIGCMAHARRKFFELHATNKSQLAEQALRYIQVLYEIEREVRD--LEPDLRRRI 390
           S   VT + C AHARR+FFE    N ++ AE AL +IQ LY +E   R+  L+ D R+  
Sbjct: 321 SRKEVTHLACWAHARREFFEAK-NNDAKRAETALLFIQKLYGVEAHCREKGLDADQRKAY 379

Query: 391 RQEKAAPAMDVLHTWMIAQRERMHDGVAIAKAFDYSLKRWTALSRYLDDGAVPIDNNHAE 450
           R + A P ++    W  A+   +    A+ KA  YS+ RW  L  YL DG + IDNN  E
Sbjct: 380 RLDHALPVLNGFAEWFKAELPNVLPKSAMGKAMLYSMNRWAELCNYLLDGNLEIDNNLIE 439

Query: 451 QQIRPWALGRKNWLYAGSLRSGQRAAALMSLIQSAKLNGHDPYAYLKDVFTRLPTQRASE 510
             IRP ALGRKN+L+AGS +  +RAA   S     K    +PY +LK V   +      +
Sbjct: 440 NTIRPLALGRKNYLFAGSHKGAERAAIAYSFFAMCKKEDINPYEWLKYVMDNIMDTNHRD 499

Query: 511 IAELLPHNW 519
           I +L P N+
Sbjct: 500 IRKLYPRNY 508