Pairwise Alignments

Query, 1203 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 1204 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  676 bits (1744), Expect = 0.0
 Identities = 418/1215 (34%), Positives = 651/1215 (53%), Gaps = 34/1215 (2%)

Query: 1    MKTLRLLLVQSLILLTCLLATTLYAQEPELTELQIHAPVTTPKVIFAPQTRAWLSNRPEV 60
            M T RLL   +++L+       +   EP   +L  HA +  P +        WL  R  +
Sbjct: 1    MTTTRLLRFTAILLIGLFSPAAMALDEPHTLQLLGHATLENPGLELDESDWRWLRQRRTL 60

Query: 61   TAAIWRGAWPPLHMGFEQNQFEGVAADYLGVIQAATGIRLKVLRFASRAEAREALLQGRV 120
               +    + P  +      FEG+ ADY  +I     + ++V R+ +R E  EAL  G+V
Sbjct: 61   VMGVSAPDYAPFDLS-NNKDFEGITADYAWLISLILSVPIEVRRYDTRDEVIEALKLGQV 119

Query: 121  DMLALHDVSEGQEGAITQSRPYLLNNKVIAHRIGETRQLSSDLAGQRLA----YVGDDAV 176
            D++   +  E  +  +  SR Y  +  V+  R G++  LS+DLAG+R+A    Y+  DAV
Sbjct: 120  DLVGSANGYEAADKGLVLSRSYANDQPVLITRAGDSHLLSADLAGKRVAMLYHYMQPDAV 179

Query: 177  GALLKQQYPKATLIQYTNHLNGLTSLIYEQADAFLTDAVVGEYLIRVLYNNDIYIAGDAT 236
             A     YPKA L+ Y +    + S+ + QAD +L D +   YLI+  + N+I +A  + 
Sbjct: 180  QA----YYPKAQLLLYGSTHQAIGSVAFGQADVYLGDIISARYLIKKNHLNNIRMADFSG 235

Query: 237  TTSADINFAVSDRKPQLLAAINDTLNALPQNDMKRITSRWGLGDHFVADRSPLELTSEEL 296
                   FA +    +LL  IN  L  +P +    I  RW   D  V +   L L+  E 
Sbjct: 236  LEVNPFGFAFTADNIRLLNIINAALAVIPASQQMSILRRWSAADSGVLEADRLRLSDSEQ 295

Query: 297  TWIENHKKIKVVLAASYAPLSFYDQNNRLQGLTADLLAILAQRTGLEIDVVRSDSVSNML 356
             W+E H ++KV +   + PLSF D+  +  GL+ ++L+ ++ RTGL+ ++V  +S++  +
Sbjct: 296  RWLEKHPRVKVAVLDKFMPLSFLDERGQFVGLSDEVLSRISLRTGLKFEMVHGNSLTRQI 355

Query: 357  KRLEDNQVDLIAALSIGDLRLNPSQYTRPYTVSPFVVITKRQSP-IRDLSELNGKRLAIP 415
              +   Q D++A ++    R    ++TRPY  +P+V++ +     +  L ++ GKRLA  
Sbjct: 356  DEVSSGQADMLAVITPSVERAEKVRFTRPYLSNPYVLVARASDERLLTLEDMPGKRLAFI 415

Query: 416  VGNPLTKWLQQQHPGVIQVPVETAARGVELVSNGDVTASVHTQLGADYFIKHHFRSDLMI 475
             GN L   + + +PG+  V V      ++LV+ G V A++ + + A Y I  ++R  L I
Sbjct: 416  GGNSLGAQIARDYPGIQFVDVGNPEAAMDLVAKGSVDATIVSLISARYMIARNYRDRLRI 475

Query: 476  SGMVGPNPARIGMVVSTEDMPLKSIINKVLLEIPPEEFKTLSDRWRNHAAPAVASSWSTY 535
            +  +G  PARI   V+   + L SI+ K LL I PEE   LS+RWR+       S WS++
Sbjct: 476  TSTIGTEPARIAFGVNRSQLELYSILEKALLSITPEEMDELSNRWRSEII-IDDSYWSSH 534

Query: 536  KSSVYKVIGVALLFLLAFLIWNYYLQAQIKKRKRAETALSDQLSFSKTLIDGSPIALYVR 595
            ++ + +  G+A L LL  L W  YL+  I KR +AE ALSDQ+ F   LIDG+P  +YVR
Sbjct: 535  RNVIIQGFGLAALLLLVTLGWVLYLRNLIHKRAQAEQALSDQMRFMSVLIDGTPHPIYVR 594

Query: 596  DKAGKLVHCNRAYLEFLQITHEDVLGKTLPDAEILPVSLSAQYDQIYQNSEQGAEPAFAD 655
            D+ G+L+ CN AYL+      EDV+GKT+   +      +  +   Y +  +  EP   D
Sbjct: 595  DRQGRLMACNNAYLDVFGFKLEDVIGKTVVQTDTGNPPQAQSFHADYLSLMERGEPQIQD 654

Query: 656  LEIEVQ-GQPHRIYHWTLPFQSSAGEFSGVIGGWLDISEREQLVEQLRVAKQAADEANES 714
              ++V  G    IY W LP++ S G   G+I GW+D+SER++L+ QL+ AK+ AD AN +
Sbjct: 655  RVLKVPGGGVLTIYQWMLPYRDSNGAVVGMIAGWVDVSERQRLLGQLQEAKEEADAANRA 714

Query: 715  KSIFLASMSHEIRTPISALIGLIEMLRVRGGTPQQINDNLAVAHESAQSLLSLIGDILDL 774
            K+ FLA+MSHEIRTP++A+IG+IE+ +      +   D L VA  +++S+L LIGDILD+
Sbjct: 715  KTTFLATMSHEIRTPMNAVIGMIELAQKNAEQGRVDQDALEVASMASRSMLELIGDILDI 774

Query: 775  SKIEAGAMVLSPRPTRLSELLHSVHKLFEINARNKHLTFDLIID-VQDQHVIIDALMLNQ 833
            ++IE G + LS     L ELL SV ++FE  AR+K L   + +D + D+ V+ID L   Q
Sbjct: 775  ARIETGHLSLSLEQANLHELLASVARVFEGLARDKGLLLQVELDPMIDRAVLIDPLRFKQ 834

Query: 834  IIANLVSNAIKFTEQGFVQLSLKQSPNDSESNLARYVIEVRDSGLGLNEQQKKAIFEPFV 893
            +++NL+ NAIKFT  G V+L  + +P  +  +L+  +  V D+G+G++ + ++ +F PF+
Sbjct: 835  VVSNLLGNAIKFTATGQVRLGAQSTPTLAGDHLSLRLC-VEDTGIGISAEDQQRLFSPFI 893

Query: 894  QVVSAPTSTR-GTGLGLSICMRLAQLLEAQLSVDSQPDKGSSFKLQFEAERTLPEDVQES 952
            Q  +   S R G+GLGL I   L +++  QL + S   KG+   L           V  +
Sbjct: 894  QGSNNDQSARSGSGLGLVISRNLCEMMGGQLHLSSVLGKGTRVDLTLTLATATATPVY-A 952

Query: 953  TQPQAPAGMSLNILVAEDHAANRLLLCQQLEYLGHNAIPCDDGETALAQWQAADPPFDLT 1012
              P APA  +LN+LV +D+ ANRLLL +QL +LGH  +  +DG    A WQ  D  FD  
Sbjct: 953  PAPPAPATHALNLLVVDDYPANRLLLARQLSFLGHRIVTAEDGAEGFALWQ--DGQFDGV 1010

Query: 1013 ITDCNMPHMDGYELTRRIRTLEQSRGLGLHPIFGLTANAQSHIIQDCLDAGMTQCLFKPI 1072
            ITD NMP MDGY L R IR  E+ RGL    + G TANAQ    + C  AGM  CLFKP 
Sbjct: 1011 ITDSNMPIMDGYTLARDIRAQERQRGLVPCLLLGFTANAQPEETERCRQAGMDGCLFKPT 1070

Query: 1073 GIEILAEQIYAVTAQIERQ--------VKAASTTGGELEKLRILCPDAYSPLVEELINTN 1124
            G++ L   + + TA  E +            + TGG+   L        + L+  L+++ 
Sbjct: 1071 GLDDLRTALASRTAAPEEKEVVPVCDLSTLVALTGGDTAGL--------NELLAPLLDSL 1122

Query: 1125 RQDAARLEQMLINNELKKISGLAHKIKGGAQLADARNLIEACMQLESLAHLDDANACEEQ 1184
             +D   L  +    +  K+  LAH++KGGA++  ++ L+  C  LE +    D +A    
Sbjct: 1123 AEDRLVLSTLRARTDFGKLHDLAHRVKGGARMVKSQALVACCETLEDVCERRDRDALAAT 1182

Query: 1185 IKTVIQIMLSLEQEL 1199
            +  +   M  L   L
Sbjct: 1183 VDAIGHAMDRLHHSL 1197