Pairwise Alignments

Query, 1203 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 1215 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  716 bits (1848), Expect = 0.0
 Identities = 427/1210 (35%), Positives = 658/1210 (54%), Gaps = 25/1210 (2%)

Query: 1    MKTLRLLLVQSLILLTCLLATTLYAQEPELTELQIHAPVTTPKVIFAPQTRAWLSNRPEV 60
            +K   ++L   + L T +LA     +   L     +  + TP        R WL N+ E+
Sbjct: 9    IKDYLIILSAGVCLSTTVLAAATQPEHYNLLSRAGNVQLDTP---MDATQRRWLQNKREL 65

Query: 61   TAAIWRGAWPPLHMGFEQNQFEGVAADYLGVIQAATGIRLKVLRFASRAEAREALLQGRV 120
                    +PP  +      +EG+ ADY GV+  A  + ++V R+ +R  + +AL  G +
Sbjct: 66   ILGTAAPDYPPFDITSSGYDYEGITADYAGVLAKALALPVRVQRYPTREASIQALESGEI 125

Query: 121  DMLALHDVSEGQEGAITQSRPYLLNNKVIAHRIGETRQLSSDLAGQRLAYVGDDAVGALL 180
            D+L   +  E     +T S PY ++  V+  R GETR LS  LAG RL+ V        +
Sbjct: 126  DLLGSSNGFEATHPLLTLSAPYAVDQPVLVTREGETRSLSDGLAGLRLSLVYHYLPLEEV 185

Query: 181  KQQYPKATLIQYTNHLNGLTSLIYEQADAFLTDAVVGEYLIRVLYNNDIYIAGDATTTSA 240
            ++ YPKA +  Y ++ N L ++ ++QAD FL D +   Y+I   Y  +I++A      + 
Sbjct: 186  QKLYPKAIIRAYPSYQNALNAVAFDQADVFLGDTISTHYMINKGYLKNIHMANFGKHEAY 245

Query: 241  DINFAVSDRKPQLLAAINDTLNALPQNDMKRITSRWGLGDHFVADRSPLELTSEELTWIE 300
              +FA+   +P LL  +N  L ALP ++ + I  RW  G   +     L+LT  E  W++
Sbjct: 246  GFSFALRQDQPILLNIVNAVLAALPTHERENIAKRWSAGSDILLTDQKLQLTQREERWLK 305

Query: 301  NHKKIKVVLAASYAPLSFYDQNNRLQGLTADLLAILAQRTGLEIDVVRSDSVSNMLKRLE 360
             H  + V+   ++APL+F+D +   +G+TADLL ++  RTGL  ++ R   ++ M+++++
Sbjct: 306  AHPVVTVIANETFAPLTFFDADGNFRGITADLLELIRLRTGLRFEIQRGRDINAMIEQID 365

Query: 361  DNQVDLIAALSIGDLRLNPSQYTRPYTVSPFVVITKRQ--SPIRDLSELNGKRLAIPVGN 418
              +VD+I A+     R     ++RPY  + +V++T+++  +P+ +L ++ GKRLAI  GN
Sbjct: 366  TGKVDIIGAIVPSSERETQLNFSRPYLENSYVLLTRKEPDAPL-NLEQMAGKRLAITQGN 424

Query: 419  PLTKWLQQQHPGVIQVPVETAARGVELVSNGDVTASVHTQLGADYFIKHH-FRSDLMISG 477
            PL   L++  P +  V      +  EL++ G V  +V++ + A+Y +  H F+  L I  
Sbjct: 425  PLEVTLRKDFPHIQLVETSDTFKAAELLAQGHVEGAVNSLVVANYLLSSHVFQDRLQIGT 484

Query: 478  MVGPNPARIGMVVSTEDMPLKSIINKVLLEIPPEEFKTLSDRWRNHAAPAVASSWSTYKS 537
             +G  PA   +  S +   L SI++K LL I P+E   ++ RWR + A A  S W  Y  
Sbjct: 485  SIGTLPALFALATSRDATELSSILDKALLSIAPDELGVINSRWRGYTA-ASDSYWRDYND 543

Query: 538  SVYKVIGVALLFLLAFLIWNYYLQAQIKKRKRAETALSDQLSFSKTLIDGSPIALYVRDK 597
             + ++I    L LL  L WN Y++ QI+ R+ AE AL+DQ  F + L++ +P  +YVRD+
Sbjct: 544  LIAQIIIGTGLLLLISLAWNAYMRRQIQHRRMAERALNDQFEFMRALVNETPHPIYVRDR 603

Query: 598  AGKLVHCNRAYLEFLQITHEDVLGKTLPDAEILPVSLSAQYDQIYQNSEQGAEPAFADLE 657
             G L  CN +YL+   +  EDV+GK+         + ++QY   YQ       P   D  
Sbjct: 604  NGLLQTCNDSYLQVFDVKREDVIGKSALQISTALETEASQYHADYQRVVAQGNPLIVDRP 663

Query: 658  IEVQGQPHRIYHWTLPFQSSAGEFSGVIGGWLDISEREQLVEQLRVAKQAADEANESKSI 717
            + ++G+   IYHW LP++ S GE  G+IGGW+DISER QL ++LR AK+ ADEAN +KS 
Sbjct: 664  LHIRGKKLTIYHWILPYRDSTGEVQGIIGGWIDISERRQLFDELRAAKERADEANRAKST 723

Query: 718  FLASMSHEIRTPISALIGLIEMLRVRGGTPQQINDNLAVAHESAQSLLSLIGDILDLSKI 777
            FLA+MSHEIRTP++A+IG++E+   R          + VA+ SA+ LL LIGDILD+++I
Sbjct: 724  FLATMSHEIRTPMNAVIGMLELTLKRADQGHLDRPAIEVAYHSAKDLLELIGDILDIARI 783

Query: 778  EAGAMVLSPRPTRLSELLHSVHKLFEINARNKHLTFDLIID----VQDQHVIIDALMLNQ 833
            E+G + LSP    L +++ SV ++F+  AR K  T  L+++    + D  V+ID L   Q
Sbjct: 784  ESGRLSLSPERVNLKDVIESVVRVFDGLARQK--TLSLLLEFKPGLDDTDVLIDPLRFKQ 841

Query: 834  IIANLVSNAIKFTEQGFVQLSLKQSPNDSESNLARYVIEVRDSGLGLNEQQKKAIFEPFV 893
            +++NLVSNAIKFTE+G V++ ++    D    +   ++ V D+G+G++ + +  +FEPF 
Sbjct: 842  VLSNLVSNAIKFTERGEVKVKVEVHATDLPQQVEMKLV-VEDTGIGISREDQLRLFEPFS 900

Query: 894  QVVSAPTSTR-GTGLGLSICMRLAQLLEAQLSVDSQPDKGSSFKLQFEAERTLPEDVQES 952
            Q  ++    R G GLGL IC  L  ++  QLS+ S P  G+   +  +     P    E 
Sbjct: 901  QADNSGHLARSGAGLGLVICRSLCAMMGGQLSLSSVPMVGTQVYVSLKMHSLQPVHAVEE 960

Query: 953  TQPQAPA-GMSLNILVAEDHAANRLLLCQQLEYLGHNAIPCDDGETALAQWQAADPPFDL 1011
             +P  P     LN+LV +DH ANRLL+CQQL YLGH       G      W+     FDL
Sbjct: 961  PKPATPTPAPVLNVLVVDDHPANRLLMCQQLGYLGHQFTAAQHGAAGFQAWR--QEHFDL 1018

Query: 1012 TITDCNMPHMDGYELTRRIRTLEQSRGLGLHPIFGLTANAQSHIIQDCLDAGMTQCLFKP 1071
             I DCNMP M+GYEL+R IR  EQ   L    I G TANAQ    + C +AGM  CLFKP
Sbjct: 1019 VIADCNMPIMNGYELSRSIREYEQREQLPPCVILGFTANAQPEEKRRCAEAGMNDCLFKP 1078

Query: 1072 IGIEILAEQIYAVTAQIERQVKAASTTGGELEKLRILCPDAYSPLVEELINTNRQDAARL 1131
            I + IL  Q+    AQI     +       L+ L    P     L+EEL++++  D   +
Sbjct: 1079 ISLTILERQL----AQIGPHPTSTLLDLSSLDALTGGDPQLSRRLLEELLSSSAHDRQEI 1134

Query: 1132 EQMLINN-ELKKISGLAHKIKGGAQLADARNLIEACMQLE-SLAHLDDANACEEQIKTVI 1189
              ++     L+ I   AHKIKG A++  A  L   C  LE   A  D+    E  IKT+ 
Sbjct: 1135 IALVARQAPLQDIIEQAHKIKGAARIVQASVLAAQCEALEQGCARGDELPLIETGIKTLE 1194

Query: 1190 QIMLSLEQEL 1199
            + ML LE++L
Sbjct: 1195 KCMLELERQL 1204