Pairwise Alignments

Query, 1203 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 1093 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  318 bits (815), Expect = 2e-90
 Identities = 209/515 (40%), Positives = 303/515 (58%), Gaps = 17/515 (3%)

Query: 697  LVEQLRVAKQAADEANESKSIFLASMSHEIRTPISALIGLIEMLRVRGGTPQQINDNLAV 756
            L+EQLR AK  A++A+++KS FLA+MSHEIRTP++A+IGL+E+      + +     L  
Sbjct: 581  LLEQLRQAKDDAEQASQTKSTFLATMSHEIRTPMNAVIGLLELALEDSRSGRSDAQTLQT 640

Query: 757  AHESAQSLLSLIGDILDLSKIEAGAMVLSPRPTRLSELLHSVHKLFEINARNKHLTFDLI 816
            AH+SA  LL LIGDILD+S+IE+G + L P PT L EL+ +  ++FE NAR K L     
Sbjct: 641  AHDSAIGLLELIGDILDISRIESGHISLQPVPTNLVELVRATLRVFEGNARAKGLHLHGE 700

Query: 817  IDVQDQHVIIDALMLNQIIANLVSNAIKFTEQGFVQLSLKQSPNDSESNLARYVIEVRDS 876
            +  +   V+ D L L QI++NL+SNAIKFT++G VQ  L   P  +   +    + VRD+
Sbjct: 701  LPAEPVWVLADPLRLKQILSNLISNAIKFTDRGEVQACL-LLPKVAGHGILAIELNVRDT 759

Query: 877  GLGLNEQQKKAIFEPFVQVVSAPTSTRGTGLGLSICMRLAQLLEAQLSVDSQPDKGSSFK 936
            G+G++   +  +F  FVQ V  P + +G GLGL I   LA+L+   LS+ S    G+  +
Sbjct: 760  GIGISPADQARLFSAFVQ-VDGPRARQGAGLGLVISRTLAELMGGALSLQSVEGVGTRVQ 818

Query: 937  LQFE---AERTLPEDVQESTQPQAPAGMSLNILVAEDHAANRLLLCQQLEYLGHNAIPCD 993
            +       E     D Q +T  ++ +G  LNILV +D+ AN LLL +QL+ LGH+    +
Sbjct: 819  VSLRLPVCEAPAQADPQLTTH-ESNSG-PLNILVVDDYPANLLLLERQLQTLGHHVTLAE 876

Query: 994  DGETALAQWQAADPPFDLTITDCNMPHMDGYELTRRIRTLEQSRGLGLHPIFGLTANAQS 1053
            +GE ALA+WQ A   FDL ITDC+MP MDG+ELTRRIR+LE  RGL    I G+TANAQ+
Sbjct: 877  NGEIALARWQEA--RFDLVITDCSMPVMDGHELTRRIRSLEGERGLPAGRILGVTANAQA 934

Query: 1054 HIIQDCLDAGMTQCLFKPIGIEILAEQIYAVTAQIERQVKAASTTGGELEKLRILCPD-- 1111
                 CL +GM +CLFKPIG+  L   +  V  Q  +       +G +L +LR L  D  
Sbjct: 935  EERTRCLASGMDECLFKPIGLRTLKTHLPQVRPQ--QPSPEPFHSGFDLAELRHLTQDDE 992

Query: 1112 -AYSPLVEELINTNRQDAARLEQMLINNELKKISGLAHKIKGGAQLADARNLIEACMQLE 1170
                 L+E+L  +  +D A L  +  +   + +  LAH+IKGGA++   R +++ C  +E
Sbjct: 993  QLTRHLLEQLSISVGEDLAALRALSTDAPDETVRALAHRIKGGAKMIRVRTVVKDCEAIE 1052

Query: 1171 SLAHLDDANACEE--QIKTVIQIMLSLEQELLETI 1203
              AH       E+  Q++  +Q +L   +E L  I
Sbjct: 1053 H-AHAKGLPTVEQRAQLQVSLQALLDEMREALNAI 1086



 Score =  299 bits (765), Expect = 1e-84
 Identities = 189/582 (32%), Positives = 300/582 (51%), Gaps = 5/582 (0%)

Query: 8   LVQSLILLTCLLATTLYAQEPELTELQIHAPVTTPKVIFAPQTRAWLSNRPEVTAAIWRG 67
           L+ S++L   L  +T      E   L   +      +  +   R WL  R  +     R 
Sbjct: 4   LLASVLLAIGLANSTELQASSEPRHLLARSISAAAPLTLSGDDRHWLKQRERLVMGSARP 63

Query: 68  AWPPLHMGFEQNQFEGVAADYLGVIQAATGIRLKVLRFASRAEAREALLQGRVDMLALHD 127
            +PP  +   Q+ +EG++ADY G+I     I ++V RF SR EA  AL  GR+D+L   +
Sbjct: 64  DYPPFEINVSQHDYEGLSADYAGIIGEQLDIPIEVRRFDSRHEAITALRDGRIDLLGSSN 123

Query: 128 VSEGQEGAITQSRPYLLNNKVIAHRIGETRQLSSDLAGQRLAYVGDDAVGALLKQQYPKA 187
             E  +  ++ S PY  +  VI  R G + + + +LAG RLA V        ++  YPKA
Sbjct: 124 AFEAADAQLSLSTPYADDLPVIVTREGRSLKSTPELAGLRLAMVDHYLPAVSVRTLYPKA 183

Query: 188 TLIQYTNHLNGLTSLIYEQADAFLTDAVVGEYLIRVLYNNDIYIAGDATTTSADINFAVS 247
            L  Y + L GL ++   +ADA+L DA+  +Y+I   +   + I   +        FA++
Sbjct: 184 QLSLYRSTLAGLAAVALGEADAYLGDAISTDYMIGKSFQGTLKIDHFSQLAPEAFAFAIA 243

Query: 248 DRKPQLLAAINDTLNALPQNDMKRITSRWGLGD-HFVADRSPLELTSEELTWIENHKKIK 306
              P+L   ++  L+ + +++   I  RW  G+   +  R    L+ EE +WI  H  I 
Sbjct: 244 SDNPRLHRLVDKALSRISESERLNILRRWSSGNTSLLLQRHLTALSEEEESWITAHPTIS 303

Query: 307 VVLAASYAPLSFYDQNNRLQGLTADLLAILAQRTGLEIDVVRSDSVSNMLKRLEDNQVDL 366
           V++  S APL+F D  +R  G+T DLL  ++ RTGL+   V S S   M+ RL   +  +
Sbjct: 304 VLVNTSLAPLTFNDAQHRPSGITLDLLKQISLRTGLQFTPVESASSQAMIDRLVRGEAQM 363

Query: 367 IAALSIGDLRLNPSQYTRPYTVSPFVVITKR--QSPIRDLSELNGKRLAIPVGNPLTKWL 424
           I AL  G  RL   +YTRPY VSP V++T+   +SP +    L+GKR+A+  G+P    L
Sbjct: 364 IGALGYGADRLKQLRYTRPYLVSPRVLVTRNDGESPAQ-AKALDGKRIALVRGSPQQAVL 422

Query: 425 QQQHPGVIQVPVETAARGVELVSNGDVTASVHTQLGADYFIKHHFRSDLMISGMVGPNPA 484
           QQ++P    V V+     +E V+NG   A++ + + A Y+I H F+  L I+ M+   PA
Sbjct: 423 QQRYPQAEIVEVDNPLGQMEAVANGVADAALSSHINAAYYISHVFKDRLRIANMLDDAPA 482

Query: 485 RIGMVVSTEDMPLKSIINKVLLEIPPEEFKTLSDRWRNHAAPAVASSWSTYKSSVYKVIG 544
                V+ +   L++I++K LL IPPEE   L +RWR     +  S W  Y++   +V+ 
Sbjct: 483 IAAFAVAADQPQLQAILDKALLSIPPEELDQLINRWRTSTLVS-DSPWRDYRTLALQVLV 541

Query: 545 VALLFLLAFLIWNYYLQAQIKKRKRAETALSDQLSFSKTLID 586
           ++ L L   + WN YL+  I +R  A+ AL  QL+ S+ L++
Sbjct: 542 LSALLLAGVVFWNSYLRKLINQRTEAQHALQAQLALSRGLLE 583