Pairwise Alignments

Query, 1203 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 1211 a.a., two-component sensor protein from Pseudomonas putida KT2440

 Score =  656 bits (1692), Expect = 0.0
 Identities = 400/1168 (34%), Positives = 628/1168 (53%), Gaps = 18/1168 (1%)

Query: 13   ILLTCLLATTLYAQEPELTELQIHAPVTTPKV--IFAPQTRAWLSNRPEVTAAIWRGAWP 70
            +LL  LL+    A   E     + A  +   V  +  P+ R W   R E+        +P
Sbjct: 10   LLLVLLLSGATQAGHREAASFTLLARSSARPVQPVLTPEQRQWREGRQELVLGTSAPDYP 69

Query: 71   PLHMGFEQNQFEGVAADYLGVIQAATGIRLKVLRFASRAEAREALLQGRVDMLALHDVSE 130
            P  +    N ++G+ A+Y  +I  A  + ++VLRF+SR  A EAL  G +D+L   +  E
Sbjct: 70   PFDITGGGNDYQGLTAEYANLIGKALQLPVRVLRFSSRQAAVEALRHGDIDLLGSANGYE 129

Query: 131  GQEGAITQSRPYLLNNKVIAHRIGETRQLSSDLAGQRLAYVGDDAVGALLKQQYPKATLI 190
                 +  SRPY ++  V+  R  E R L +DLAG RL  +        +   YPKA L+
Sbjct: 130  AASDGLALSRPYAVDQPVLVTREDENRALDTDLAGMRLGMLYHYLPRQEVLTAYPKAELL 189

Query: 191  QYTNHLNGLTSLIYEQADAFLTDAVVGEYLIRVLYNNDIYIAGDATTTSADINFAVSDRK 250
             + +    L ++ + QAD F+ D +   Y +   +   + +A      +    FA+  + 
Sbjct: 190  AFGSSSQALNAVAFGQADVFIGDTISTHYQLNRGHLPRLRMANFGKHEAIGFGFALRQQD 249

Query: 251  PQLLAAINDTLNALPQNDMKRITSRWGLGDHFVADRSPLELTSEELTWIENHKKIKVVLA 310
              LL  +N  L+         I  RW  G   +     L+L++ E  W+E H  ++V   
Sbjct: 250  TVLLDLVNTILDRQSPAIRSSIFKRWSAGSDLLLSDRQLQLSAAEQQWLEKHPVMRVAAD 309

Query: 311  ASYAPLSFYDQNNRLQGLTADLLAILAQRTGLEIDVVRSDSVSNMLKRLEDNQVDLIAAL 370
             + APLS++D +   +G+TADLL ++  RTGL  +V R+  +++M+ RL+D + D+IAAL
Sbjct: 310  DAAAPLSYFDDSGHFRGITADLLELIRLRTGLRFEVQRASGIADMVARLKDGRADVIAAL 369

Query: 371  SIGDLRLNPSQYTRPYTVSPFVVIT-KRQSPIRDLSELNGKRLAIPVGNPLTKWLQQQHP 429
            +      +  Q +RPY  S +V++  K  + +  L +L G R+AI   + +   L + +P
Sbjct: 370  ASAGKAGDDLQISRPYLESAYVLVNHKDNNALSSLEQLQGHRIAITRYSTMNAMLSRDYP 429

Query: 430  GVIQVPVETAARGVELVSNGDVTASVHTQLGADYFIKHHFRSDLMISGMVGPNPARIGMV 489
             +  V  E+A   + L+++G V A + T + A++ +  +   +L+I   VG  PA   M 
Sbjct: 430  KISWVETESAFYSMALLNSGAVDAVITTLIDANHALASN--PELVIRTSVGSEPANFAMA 487

Query: 490  VSTEDMPLKSIINKVLLEIPPEEFKTLSDRWRNHAAPAVASSWSTYKSSVYKVIGVALLF 549
                   L SI++K LL I PEE   +++RWR        +S    + ++  V+  A+L 
Sbjct: 488  TIAPSPALLSILDKALLSISPEELGVINNRWRGFGRHEDDNSKGYSRLALQVVLATAVLL 547

Query: 550  LLAFLIWNYYLQAQIKKRKRAETALSDQLSFSKTLIDGSPIALYVRDKAGKLVHCNRAYL 609
            LLA L+WN  L+ QI++R+RAE AL+DQL+F + L++G+P  +YVRD+ G L  CN +YL
Sbjct: 548  LLA-LLWNARLRLQIRQRQRAERALNDQLAFMRALLNGTPHPMYVRDREGCLKSCNYSYL 606

Query: 610  EFLQITHEDVLGKTLPDAEILPVSLSAQYDQIYQNSEQGAEPAFADLEIEVQGQPHRIYH 669
            E +Q   + V+GK L D+       + Q    YQ       P   D  + ++G+   IYH
Sbjct: 607  EAVQARSDQVIGKKLKDSLFADSEQARQIQADYQKVMAAGSPLIKDRPLRIKGRDLTIYH 666

Query: 670  WTLPFQSSAGEFSGVIGGWLDISEREQLVEQLRVAKQAADEANESKSIFLASMSHEIRTP 729
            W LP++ S GE  G+IGGW+DISER QLV +LR AKQ AD+AN +KS FLA++SHEIRTP
Sbjct: 667  WILPYRDSLGEVQGIIGGWIDISERRQLVLELRQAKQQADDANRAKSTFLATISHEIRTP 726

Query: 730  ISALIGLIEMLRVRGGTPQQINDNLAVAHESAQSLLSLIGDILDLSKIEAGAMVLSPRPT 789
            ++A+IG++E+   R    +     L +AH SA+ LL LIGDILD+ +IE+G + L+P   
Sbjct: 727  MNAVIGMLELAVKRADQGRVDRSALELAHHSAKDLLGLIGDILDIVRIESGHLSLAPEVV 786

Query: 790  RLSELLHSVHKLFEINARNKHLTFDL-IIDVQDQHVIIDALMLNQIIANLVSNAIKFTEQ 848
             L+ L+ SV ++F+  AR K L  ++ I      HV++D L   Q+++NLVSNAIKFTE 
Sbjct: 787  DLAALVESVARIFDGQARQKGLALEVQIAPAARCHVLLDPLRFKQVLSNLVSNAIKFTEH 846

Query: 849  GFVQLSLKQSPNDSESNLARYVIEVRDSGLGLNEQQKKAIFEPFVQVVSAPTSTR-GTGL 907
            G V++S++   +D  S  A   +EVRDSG+G++    + +F PF+Q        R GTGL
Sbjct: 847  GQVRISVRLL-DDGTSTPAVLELEVRDSGIGIHPDDLQRLFNPFIQANPHSQGARAGTGL 905

Query: 908  GLSICMRLAQLLEAQLSVDSQPDKGSSFKLQFEAERT----LPEDVQESTQPQAPAGMSL 963
            GL+IC  L +++   LS+ S  D G+  +L+   +R      P+ + E      P    L
Sbjct: 906  GLAICRNLCEMMGGSLSMKSLEDVGTQVRLKMPLQRVDGAEQPKPLPEQLDVPDP---RL 962

Query: 964  NILVAEDHAANRLLLCQQLEYLGHNAIPCDDGETALAQWQAADPPFDLTITDCNMPHMDG 1023
            N+LV +DH AN  L+ QQL YLG       DG+  LA W+  D  FD+ + DCNMPHM+G
Sbjct: 963  NVLVIDDHPANLQLMAQQLGYLGLEHASARDGQEGLATWREGD--FDVLVLDCNMPHMNG 1020

Query: 1024 YELTRRIRTLEQSRGLGLHPIFGLTANAQSHIIQDCLDAGMTQCLFKPIGIEILAEQIYA 1083
            Y+L   +R  E+        I G TANAQ  + + CL AGM  CL KPI +  L++++  
Sbjct: 1021 YQLATAVRAEERHGKRPPCTILGYTANAQPEVRRKCLTAGMDDCLLKPISLSTLSQRLAG 1080

Query: 1084 VTAQIERQVKAASTTGGELEKLRILCPDAYSPLVEELINTNRQDAARLEQMLINNELKKI 1143
            +  + +++ +        L  +    P      +E L  + + D A L  +   ++   I
Sbjct: 1081 IRPRRQQRPRRKLYQLDGLAAVVGPDPVDRQRFLETLHQSLQADLASLMALHPQHDSGAI 1140

Query: 1144 SGLAHKIKGGAQLADARNLIEACMQLES 1171
            +  AHK+   A++ +A +L+ AC  LE+
Sbjct: 1141 AEQAHKVLSAARMLEAPDLMAACEALEA 1168