Pairwise Alignments

Query, 1203 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 1197 a.a., acid-sensing system histidine kinase EvgS from Escherichia coli ECRC62

 Score =  450 bits (1157), Expect = e-130
 Identities = 330/1201 (27%), Positives = 588/1201 (48%), Gaps = 38/1201 (3%)

Query: 14   LLTCLLATTLYAQEPELTE---LQIHAPVTTPKVIFAPQTRAWLSNRPEVTAAIWRGAWP 70
            LL C L +T+   + +  E   +  +  VT   V  + +   WL+++  +  A+ +    
Sbjct: 9    LLCCGLWSTISFADEDYIEYRGISSNNRVTLDPVRLSNKELRWLASKKNLVIAVHKSQTA 68

Query: 71   PLHMGFEQNQFEGVAADYLGVIQAATGIRLKVLRFASRAEAREALLQGRVDMLALHDV-S 129
             L     Q Q  G+ ADYL +++ A  I+L +  +A   +A +AL +G VD++  H V S
Sbjct: 69   TLLHTDSQQQVRGINADYLNLLKRALNIKLTLREYADHQKAMDALEEGEVDIVLSHLVTS 128

Query: 130  EGQEGAITQSRPYLLNNKVIAHRIGETRQLSSDLAGQRLAYVGDDAVGALLKQQYPKATL 189
                  I  ++P ++    +   + ++ +  +      +A V +     ++ Q +PKAT+
Sbjct: 129  PPLNNDIAATKPLIITFPALVTTLHDSMRPLTSPKPVNIARVANYPPDEVIHQSFPKATI 188

Query: 190  IQYTNHLNGLTSLIYEQADAFLTDAVVGEYLIRVLYNNDIYIAGDATTTSADINFAVSDR 249
            I +TN    L S+     D F+   ++   +I   + + + +      +    NF ++ +
Sbjct: 189  ISFTNLYQALASVSAGHNDYFIGSNIITSSMISRYFTHSLNVV-KYYNSPRQYNFFLTRK 247

Query: 250  KPQLL-AAINDTLNALPQNDMKRITSRWGLGDHFVADRSPLELTSEELTWIENHKKIKVV 308
            +  +L   +N  ++AL       ++  W    +      PLELT  E  WI+ H  +KV+
Sbjct: 248  ESVILNEVLNRFVDALTNEVRYEVSQNWLDTGNLAFLNKPLELTEHEKQWIKQHPNLKVL 307

Query: 309  LAASYAPLSFYDQNNRLQGLTADLLAILAQRTGLEIDVVRSDSVSNMLKRLEDNQVDLIA 368
                  P S  D+N  ++G+  D+L I+  +TGL    +      +   +L     D+I 
Sbjct: 308  ENPYSPPYSMTDENGSVRGVMGDILNIITLQTGLNFSPITVSHNIHAGTQLSPGGWDIIP 367

Query: 369  ALSIGDLRLNPSQYTRPYTVSPFVVITKRQSPIRDLSELNGKRLAIPVGNPLTKWLQQQH 428
                 + R N   +   +  +P+V + ++ +P  + +   G ++AIP    L   L++ +
Sbjct: 368  GAIYSEDRENNVLFAEAFITTPYVFVMQK-APDSEQTLKKGMKVAIPYYYELHSQLKEMY 426

Query: 429  PGVIQVPVETAARGVELVSNGDVTASVHTQLGADYFIKHHFRSDLMISGMVGPNPARIGM 488
            P V  + V+ A+     V  G++ A V TQL + Y I H++ ++L    + G   A +  
Sbjct: 427  PEVEWIQVDNASAAFHKVKEGELDALVATQLNSRYMIDHYYPNELYHFLIPGVPNASLSF 486

Query: 489  VVSTEDMPLKSIINKVLLEIPPEEFKTLSDRWRNHAAPAVASSWSTYKSSVYKVIGVALL 548
                 +  LK IINK L  IPP E   L+++W       +  +W+ Y    Y V  +++L
Sbjct: 487  AFPRGEPELKDIINKALNAIPPSEVLRLTEKWIKMPNVTI-DTWNLYSEQFYIVTTLSVL 545

Query: 549  FLLAFLIWNYYLQAQIKKRKRAETALSDQLSFSKTLIDGSPIALYVRDKAGKLVHCNRAY 608
             + + L+W +YL   +++RK  +  L +Q+SF K L D  P   YV +  G ++  N A+
Sbjct: 546  LVGSSLLWGFYLLRSVRRRKVIQGDLENQISFRKALSDSLPNPTYVVNWQGNVISHNSAF 605

Query: 609  LEFLQITHEDVLGKTLPDAEILPVSLSAQYDQIYQNSEQGAEPAFADLEIEVQGQPHRIY 668
              +    +       L +++     + +   ++   +++         EI+   +   I 
Sbjct: 606  EHYFTADYYKNAMLPLENSDSPFKDVFSNAHEVTAETKENRTIYTQVFEIDNGIEKRCIN 665

Query: 669  HWTLPFQSSAGEFSGVIGGWLDISEREQLVEQLRVAKQAADEANESKSIFLASMSHEIRT 728
            HW       A + +  I GW DI+E   L+  L V K  A +A  +KS FLA+MSHEIRT
Sbjct: 666  HWHTLCNLPASDNAVYICGWQDITETRDLINALEVEKNKAIKATVAKSQFLATMSHEIRT 725

Query: 729  PISALIGLIEMLRVRGGTPQQINDNLAVAHESAQSLLSLIGDILDLSKIEAGAMVLSPRP 788
            PIS+++G +E+L   G + +Q  + +++A+ + QSLL LIG+ILD+ KIE+G   L P+ 
Sbjct: 726  PISSIMGFLELLSGSGLSKEQRVEAISLAYATGQSLLGLIGEILDVDKIESGNYQLQPQW 785

Query: 789  TRLSELLHSVHKLFEINARNKHLTFDLIIDVQDQHVI-IDALMLNQIIANLVSNAIKFTE 847
              +  L+ +    F   A +K +         D +++ ID     Q+++NL+SNA+KFT 
Sbjct: 786  VDIPTLVQNTCHSFGAIAASKSIALSCSSTFPDHYLVKIDPQAFKQVLSNLLSNALKFTT 845

Query: 848  QGFVQLSLKQSPNDSESNLARYVIEVRDSGLGLNEQQKKAIFEPFVQVVSAPTSTRGTGL 907
            +G V+++   S    + N A   + + DSG GL++++++ +F+ + Q  SA     G+GL
Sbjct: 846  EGAVKIT--TSLVHIDDNHAVIKMTIMDSGSGLSQEEQQQLFKRYSQ-TSAGRQQTGSGL 902

Query: 908  GLSICMRLAQLLEAQLSVDSQPDKGSSFKLQFEAERTLP-EDVQESTQPQAPAGMSLNIL 966
            GL IC  L + ++  LS++S P  G++F +    E +     V+   +        L+IL
Sbjct: 903  GLMICKELIKNMQGDLSLESHPGIGTTFTITIPVEISQQVATVEAKAEHPITLPEKLSIL 962

Query: 967  VAEDHAANRLLLCQQLEYLGHNAIPCDDGETALAQWQAADPPFDLTITDCNMPHMDGYEL 1026
            +A+DH  NRLLL +QL  LG++     DG  AL   + +   +DL ITD NMP+MDG+EL
Sbjct: 963  IADDHPTNRLLLKRQLNLLGYDVDEATDGVQAL--HKVSMQHYDLLITDVNMPNMDGFEL 1020

Query: 1027 TRRIRTLEQSRGLGLHPIFGLTANAQSHIIQDCLDAGMTQCLFKPIGIEILAEQIYAV-- 1084
            TR++R  EQ+  L   PI+GLTANAQ++  +  L  GM  CLFKP+ +++L   +  +  
Sbjct: 1021 TRKLR--EQNSSL---PIWGLTANAQANEREKGLSCGMNLCLFKPLTLDVLKTHLSQLHQ 1075

Query: 1085 TAQIERQVKAASTTGGELEKLRILCPDAYSPLVEELINT----NRQDAARLEQMLINNEL 1140
             A I  Q +       ++E L+    +    L++E++ T      +D     Q L   + 
Sbjct: 1076 VAHIAPQYRHL-----DIEALKNNTANDLQ-LMQEILMTFQHETHKDLPAAFQALEAGDN 1129

Query: 1141 KKISGLAHKIKGGAQLADARNLIEACMQLESLAHLDDANACEEQIKTVIQIMLSLEQELL 1200
            +      H+I G A + + + LI    QLE     DD+         ++Q++ S+++ + 
Sbjct: 1130 RTFHQCIHRIHGAANILNLQKLINISHQLEITPVSDDSK------PEILQLLNSVKEHIA 1183

Query: 1201 E 1201
            E
Sbjct: 1184 E 1184