Pairwise Alignments

Query, 638 a.a., DNA mismatch repair protein from Pseudomonas simiae WCS417

Subject, 615 a.a., DNA mismatch repair endonuclease MutL from Escherichia coli ECRC101

 Score =  432 bits (1110), Expect = e-125
 Identities = 254/566 (44%), Positives = 340/566 (60%), Gaps = 37/566 (6%)

Query: 12  IELLSPRLANQIAAGEVVERPASVIKELLENSIDSGAKRIDVDVEQGGVKLLRVRDDGSG 71
           I++L P+LANQIAAGEVVERPASV+KEL+ENS+D+GA RID+D+E+GG KL+R+RD+G G
Sbjct: 3   IQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCG 62

Query: 72  ISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRSAEQAWQ 131
           I  D+L LALARHATSKI  L+DLE ++SLGFRGEALASISSV+RLTLTSRT   ++AWQ
Sbjct: 63  IKKDELALALARHATSKIASLDDLEAIISLGFRGEALASISSVSRLTLTSRTAEQQEAWQ 122

Query: 132 VETEGRDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALAR 191
              EGRDM   V+PAAHPVGT++EV DLF+NTPARRKFL+ EKTEF+H+ E+I+R+ALAR
Sbjct: 123 AYAEGRDMDVTVKPAAHPVGTTLEVLDLFYNTPARRKFLRTEKTEFNHIDEIIRRIALAR 182

Query: 192 FDVAFHLRHNGKTILSLHEAHDDAARARRVSAICGPGFLEQALPIEIERNGLRLWGWVGL 251
           FDV  +L HNGK +       +   + RR+ AICG  FLEQAL IE +   L L GWV  
Sbjct: 183 FDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGTAFLEQALAIEWQHGDLTLRGWVAD 242

Query: 252 PTFSR-SQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPSVVDVN 310
           P  +  + A++QY +VNGR +RD+L+ HA+RQA  D L   + P FVL+ E+DP  VDVN
Sbjct: 243 PNHTTPALAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVDVN 302

Query: 311 VHPTKHEVRFRDGRMVHDFLYGTLHRTLGDVRPDDQLAAPIVTAVVRPSGPQAGEFGPQG 370
           VHP KHEVRF   R+VHDF+Y  +   L       QL  P+         P+     P  
Sbjct: 303 VHPAKHEVRFHQSRLVHDFIYQGVLSVL-----QQQLETPLPLDDEPQPAPR-----PIP 352

Query: 371 EMSLAANLLQSPQSQPSYTAPNAGAGSGYQYQYTPRPQS----AVPVAEAQAAYRE---- 422
           E  +AA   ++  ++P+   P A        +YTP P S    A P   AQ  Y++    
Sbjct: 353 ENRVAAG--RNHFAEPAVREPVAP-------RYTPAPASGSRPAAPWPNAQPGYQKQQGE 403

Query: 423 -----FFAPLPGAEPGAPVAL-PEGGGDIPPLGYALAQLKGIYILAENAHGLVLVDMHAA 476
                   P P  +P AP    P    +    G  L  +     L E    + L+ +  A
Sbjct: 404 VYRQLLQTPAPMQKPKAPEPQEPALAANSQSFGRVLTIVHSDCALLERDGNISLLALPVA 463

Query: 477 HERIMYERLKIAMASEGLSGQPLLVPESLAVSQREADCAEEHHSVFQKLGFELQRLGPET 536
              +   ++++      +  QPLL+P  L VS  E    E+  S   +LG + Q    + 
Sbjct: 464 ERWL--RQVQLTPGEAPVCAQPLLIPLRLKVSGEEKSALEKAQSALAELGIDFQS-DAQH 520

Query: 537 LAIRQIPALLKQAEANRLVADVLADL 562
           + IR +P  L+Q     L+ +++  L
Sbjct: 521 VTIRAVPLPLRQQNLQILIPELIGYL 546