Pairwise Alignments

Query, 258 a.a., transcriptional regulator from Pseudomonas simiae WCS417

Subject, 243 a.a., helix-turn-helix transcriptional regulator from Erwinia tracheiphila SCR3

 Score =  103 bits (256), Expect = 4e-27
 Identities = 80/254 (31%), Positives = 115/254 (45%), Gaps = 30/254 (11%)

Query: 1   MNTSGDRLKALLREVHLSASDFAKNRGVTPQHVNNW-FKRGVPMGRLNEIAELLCISSRW 59
           M T  +RLK   +E  LS     ++ G++   +      +     +L EIA+ L +   W
Sbjct: 1   MKTLAERLKLARKEKGLSQKSLGESIGISQAAIQKIEVGKAKETTKLTEIAKSLGVRPEW 60

Query: 60  LRTGEGPKHPPANFLLEGPNTRKGLPTTREGSGQYLTGPACLPEKIDVEIDLHPSFTSIE 119
           L +G GP   P   +    +T   +P   E  G             +VE+   P    IE
Sbjct: 61  LSSGSGPMRGPEIPVHHPDST---IPPESEWVGVDAWDSNTHLPNDEVEV---PFLRDIE 114

Query: 120 ----------------RIRVTLHTLQALNVHPDRA--LGAYMVDNSMIDIIQQGATLAID 161
                           ++R +  TL+ +    D +  L      NSM  +I  GAT+A+D
Sbjct: 115 FACGDGRCADEDYNGFKLRFSKATLRRVGAKTDGSGVLCFPARGNSMEPVIPDGATVAVD 174

Query: 162 RGRTQIIDGEIYAVEHDGMLRIKYLYNRPGGGLRMRSHNAGEHPDEYLTYEQRFEQNVQI 221
               +I+DGE+YA+  DG  RIK LY RPGG L +RS N  EHPDE        E  V+I
Sbjct: 175 VNNKRIVDGELYAINQDGFKRIKQLYRRPGGKLEIRSFNRDEHPDEMAD-----ESGVEI 229

Query: 222 VGWVFWWSTLNNRR 235
           VG+VFW+S +  RR
Sbjct: 230 VGFVFWYSVIRYRR 243