Pairwise Alignments

Query, 632 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 469 a.a., fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) from Escherichia coli BW25113

 Score =  234 bits (598), Expect = 5e-66
 Identities = 147/325 (45%), Positives = 187/325 (57%), Gaps = 29/325 (8%)

Query: 330 PTLQQDFRKALRVFERDVPLLINGETGSGKEAFAKAVHLASQRADKAFVALNCAAIPESL 389
           P +Q  FR   R+    + +LINGE+G+GKE  A A+H  S RA   F+ALN AAIP+ L
Sbjct: 145 PAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDL 204

Query: 390 IESELFGYRGGSFTGARKEGMQGKLQQADGGTLFLDEIGDMPLALQTRLLRVLEDRLVVP 449
           IESELFG+  G+FTGA     QG+ +QADGGTLFLDEIGDMPL +QTRLLRVL D     
Sbjct: 205 IESELFGHEKGAFTGANTI-RQGRFEQADGGTLFLDEIGDMPLDVQTRLLRVLADGQFYR 263

Query: 450 LGG-EPQAVNVRIISATHRNLLERVQDGSFREDLYYRLNGLEVGLPPLRERSDKAQLL-- 506
           +GG  P  V+VRII+ATH+NL +RVQ+G FREDL++RLN + V LPPLRER +    L  
Sbjct: 264 VGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLAR 323

Query: 507 DFL--LTQEANGEPVALDPSARGALLAFAWPGNVRQLRTVLRTLVALCDEGRVGLEDLPA 564
            FL    +E   E   L P    AL   AWPGNVRQL    R L  +     V ++DLP 
Sbjct: 324 HFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPG 383

Query: 565 QIRQARPV-AVAQTKP----------------------LESPLEDAERLALLTALQQQRW 601
           ++ ++    + +Q +P                      L     + ER  L TAL+  + 
Sbjct: 384 ELFESTVAESTSQMQPDSWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQG 443

Query: 602 HMTHTAEQLGVSRNTLYRKLRRHGI 626
           H    A  LG  RNTL RKL+  G+
Sbjct: 444 HKQEAARLLGWGRNTLTRKLKELGM 468