Pairwise Alignments

Query, 632 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 461 a.a., fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein from Escherichia coli BL21

 Score =  224 bits (572), Expect = 5e-63
 Identities = 132/315 (41%), Positives = 196/315 (62%), Gaps = 16/315 (5%)

Query: 325 ICLGDPTLQQDFRKALRVFERDVPLLINGETGSGKEAFAKAVHLASQRADKAFVALNCAA 384
           I    P +    +   ++      +LI+GE+G+GKE  A+A+H  S+RA   F+ +NCAA
Sbjct: 145 ILTNSPAMMDICKDTAKIALSQASVLISGESGTGKELIARAIHYNSRRAKGPFIKVNCAA 204

Query: 385 IPESLIESELFGYRGGSFTGARKEGMQGKLQQADGGTLFLDEIGDMPLALQTRLLRVLED 444
           +PESL+ESELFG+  G+FTGA+    QG  ++A+ GTL LDEIG+MPL LQ +LLR+L++
Sbjct: 205 LPESLLESELFGHEKGAFTGAQTL-RQGLFERANEGTLLLDEIGEMPLVLQAKLLRILQE 263

Query: 445 RLVVPLGG-EPQAVNVRIISATHRNLLERVQDGSFREDLYYRLNGLEVGLPPLRERSDKA 503
           R    +GG +   V++RII+AT+R+L   V++G+FREDL+YRLN + + LPPLR+R +  
Sbjct: 264 REFERIGGHQTIKVDIRIIAATNRDLQAMVKEGTFREDLFYRLNVIHLILPPLRDRREDI 323

Query: 504 QLL--DFL--LTQEANGEPVALDPSARGALLAFAWPGNVRQLRTVLRTLVALCDEGRVGL 559
            LL   FL   + E   + + +DP A   L A++WPGN+R+L  V+   V +     +  
Sbjct: 324 SLLANHFLQKFSSENQRDIIDIDPMAMSLLTAWSWPGNIRELSNVIERAVVMNSGPIIFS 383

Query: 560 EDLPAQIRQARPVAVA---QTKP-----LESPLEDAERLALLTALQQQRWHMTHTAEQLG 611
           EDLP QIRQ  PV  A   +T P     L+  ++  E+  ++  L+QQ  + T TA  LG
Sbjct: 384 EDLPPQIRQ--PVCNAGEVKTAPVGERNLKEEIKRVEKRIIMEVLEQQEGNRTRTALMLG 441

Query: 612 VSRNTLYRKLRRHGI 626
           +SR  L  KL+ +GI
Sbjct: 442 ISRRALMYKLQEYGI 456